Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.43■□□□□ 0.22
Trim43cP86449 Gm18733-201ENSMUST00000173950 856 ntBASIC16.43■□□□□ 0.22
Trim43cP86449 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.43■□□□□ 0.22
Trim43cP86449 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.43■□□□□ 0.22
Trim43cP86449 Psmb5-202ENSMUST00000227257 622 ntBASIC16.43■□□□□ 0.22
Trim43cP86449 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim43cP86449 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim43cP86449 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim43cP86449 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim43cP86449 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim43cP86449 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim43cP86449 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.43■□□□□ 0.22
Trim43cP86449 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim43cP86449 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim43cP86449 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.43■□□□□ 0.22
Trim43cP86449 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.43■□□□□ 0.22
Trim43cP86449 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim43cP86449 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim43cP86449 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim43cP86449 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim43cP86449 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim43cP86449 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim43cP86449 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim43cP86449 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim43cP86449 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim43cP86449 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim43cP86449 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.42■□□□□ 0.22
Trim43cP86449 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim43cP86449 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim43cP86449 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim43cP86449 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim43cP86449 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim43cP86449 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim43cP86449 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trim43cP86449 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim43cP86449 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim43cP86449 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim43cP86449 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim43cP86449 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim43cP86449 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim43cP86449 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim43cP86449 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim43cP86449 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim43cP86449 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim43cP86449 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim43cP86449 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim43cP86449 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim43cP86449 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim43cP86449 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim43cP86449 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim43cP86449 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim43cP86449 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim43cP86449 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.41■□□□□ 0.22
Trim43cP86449 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
Trim43cP86449 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim43cP86449 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim43cP86449 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.41■□□□□ 0.22
Trim43cP86449 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim43cP86449 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim43cP86449 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim43cP86449 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim43cP86449 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim43cP86449 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trim43cP86449 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim43cP86449 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Trim43cP86449 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim43cP86449 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.41■□□□□ 0.22
Trim43cP86449 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim43cP86449 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim43cP86449 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim43cP86449 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim43cP86449 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim43cP86449 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.4■□□□□ 0.22
Trim43cP86449 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim43cP86449 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim43cP86449 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.39■□□□□ 0.21
Trim43cP86449 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim43cP86449 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.39■□□□□ 0.21
Trim43cP86449 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim43cP86449 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trim43cP86449 Gm17968-201ENSMUST00000194902 784 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms