Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13□□□□□ -0.33
Otx1P80205 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13□□□□□ -0.33
Otx1P80205 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13□□□□□ -0.33
Otx1P80205 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13□□□□□ -0.33
Otx1P80205 Gm42670-201ENSMUST00000201816 1292 ntBASIC13□□□□□ -0.33
Otx1P80205 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13□□□□□ -0.33
Otx1P80205 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13□□□□□ -0.33
Otx1P80205 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Otx1P80205 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.99□□□□□ -0.33
Otx1P80205 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Otx1P80205 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Otx1P80205 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Otx1P80205 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Otx1P80205 Gm12350-201ENSMUST00000121208 462 ntBASIC12.99□□□□□ -0.33
Otx1P80205 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.99□□□□□ -0.33
Otx1P80205 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.99□□□□□ -0.33
Otx1P80205 Gm43767-201ENSMUST00000198933 381 ntBASIC12.99□□□□□ -0.33
Otx1P80205 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.99□□□□□ -0.33
Otx1P80205 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.99□□□□□ -0.33
Otx1P80205 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Otx1P80205 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.99□□□□□ -0.33
Otx1P80205 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Otx1P80205 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.99□□□□□ -0.33
Otx1P80205 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.99□□□□□ -0.33
Otx1P80205 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Otx1P80205 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otx1P80205 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.98□□□□□ -0.33
Otx1P80205 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.98□□□□□ -0.33
Otx1P80205 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Otx1P80205 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otx1P80205 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otx1P80205 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otx1P80205 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.98□□□□□ -0.33
Otx1P80205 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otx1P80205 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otx1P80205 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otx1P80205 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.98□□□□□ -0.33
Otx1P80205 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.98□□□□□ -0.33
Otx1P80205 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otx1P80205 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otx1P80205 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Otx1P80205 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.98□□□□□ -0.33
Otx1P80205 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.98□□□□□ -0.33
Otx1P80205 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Otx1P80205 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.98□□□□□ -0.33
Otx1P80205 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Otx1P80205 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms