Protein–RNA interactions for Protein: P68433

Hist1h3a, Histone H3.1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3aP68433 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3aP68433 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.18□□□□□ -0.3
Hist1h3aP68433 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.18□□□□□ -0.3
Hist1h3aP68433 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.18□□□□□ -0.3
Hist1h3aP68433 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3aP68433 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3aP68433 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.18□□□□□ -0.3
Hist1h3aP68433 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3aP68433 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hist1h3aP68433 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hist1h3aP68433 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Gm45167-201ENSMUST00000208007 322 ntBASIC13.17□□□□□ -0.3
Hist1h3aP68433 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Gm7787-201ENSMUST00000216858 688 ntBASIC13.17□□□□□ -0.3
Hist1h3aP68433 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hist1h3aP68433 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3aP68433 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.16□□□□□ -0.3
Hist1h3aP68433 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.16□□□□□ -0.3
Hist1h3aP68433 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hist1h3aP68433 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.15□□□□□ -0.3
Hist1h3aP68433 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Gm4899-201ENSMUST00000178708 719 ntBASIC13.15□□□□□ -0.3
Hist1h3aP68433 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Gm43767-201ENSMUST00000198933 381 ntBASIC13.15□□□□□ -0.3
Hist1h3aP68433 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hist1h3aP68433 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms