Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Uba52P62984 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.15□□□□□ -0.3
Uba52P62984 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Uba52P62984 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Uba52P62984 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba52P62984 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Uba52P62984 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Uba52P62984 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Uba52P62984 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba52P62984 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.15□□□□□ -0.3
Uba52P62984 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Uba52P62984 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Uba52P62984 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.15□□□□□ -0.3
Uba52P62984 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Uba52P62984 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Uba52P62984 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.15□□□□□ -0.31
Uba52P62984 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Uba52P62984 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Uba52P62984 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Uba52P62984 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.14□□□□□ -0.31
Uba52P62984 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Uba52P62984 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.14□□□□□ -0.31
Uba52P62984 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Gm18206-201ENSMUST00000207027 926 ntBASIC13.14□□□□□ -0.31
Uba52P62984 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.14□□□□□ -0.31
Uba52P62984 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Rps4l-201ENSMUST00000071745 943 ntBASIC13.14□□□□□ -0.31
Uba52P62984 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Uba52P62984 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Uba52P62984 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Uba52P62984 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.13□□□□□ -0.31
Uba52P62984 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.13□□□□□ -0.31
Uba52P62984 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Uba52P62984 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Uba52P62984 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.13□□□□□ -0.31
Uba52P62984 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Rprl3-201ENSMUST00000157400 290 ntBASIC13.13□□□□□ -0.31
Uba52P62984 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Gm29707-201ENSMUST00000196325 491 ntBASIC13.13□□□□□ -0.31
Uba52P62984 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.13□□□□□ -0.31
Uba52P62984 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.13□□□□□ -0.31
Uba52P62984 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Uba52P62984 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Uba52P62984 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Uba52P62984 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Uba52P62984 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms