Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.74□□□□□ -0.37
Gabra1P62812 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Gabra1P62812 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Gabra1P62812 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Gm26039-201ENSMUST00000158152 144 ntBASIC12.74□□□□□ -0.37
Gabra1P62812 Gm44430-201ENSMUST00000203376 995 ntBASIC12.74□□□□□ -0.37
Gabra1P62812 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.74□□□□□ -0.37
Gabra1P62812 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.74□□□□□ -0.37
Gabra1P62812 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Gabra1P62812 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Gabra1P62812 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Gabra1P62812 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Gabra1P62812 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabra1P62812 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.74□□□□□ -0.37
Gabra1P62812 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Gabra1P62812 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.73□□□□□ -0.37
Gabra1P62812 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Gm10052-201ENSMUST00000168019 960 ntBASIC12.73□□□□□ -0.37
Gabra1P62812 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Mir5122-201ENSMUST00000175004 89 ntBASIC12.73□□□□□ -0.37
Gabra1P62812 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
Gabra1P62812 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Gm7729-201ENSMUST00000050143 801 ntBASIC12.73□□□□□ -0.37
Gabra1P62812 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Gm10812-201ENSMUST00000099864 546 ntBASIC12.73□□□□□ -0.37
Gabra1P62812 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.73□□□□□ -0.37
Gabra1P62812 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.73□□□□□ -0.37
Gabra1P62812 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Gabra1P62812 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gabra1P62812 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Gabra1P62812 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Gabra1P62812 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Gabra1P62812 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Gabra1P62812 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Gabra1P62812 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Gabra1P62812 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Gabra1P62812 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.72□□□□□ -0.37
Gabra1P62812 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.72□□□□□ -0.37
Gabra1P62812 Mir1668-201ENSMUST00000184114 107 ntBASIC12.72□□□□□ -0.37
Gabra1P62812 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.72□□□□□ -0.37
Gabra1P62812 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Gabra1P62812 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Gabra1P62812 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gabra1P62812 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms