Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nphp4P59240 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nphp4P59240 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nphp4P59240 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nphp4P59240 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nphp4P59240 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Nphp4P59240 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC20.33■□□□□ 0.84
Nphp4P59240 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Nphp4P59240 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Nphp4P59240 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp4P59240 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp4P59240 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp4P59240 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Nphp4P59240 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.32■□□□□ 0.84
Nphp4P59240 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp4P59240 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC20.32■□□□□ 0.84
Nphp4P59240 Gm5626-201ENSMUST00000222151 1058 ntBASIC20.32■□□□□ 0.84
Nphp4P59240 Wdyhv1-206ENSMUST00000227142 786 ntBASIC20.32■□□□□ 0.84
Nphp4P59240 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Nphp4P59240 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp4P59240 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp4P59240 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp4P59240 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Nphp4P59240 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nphp4P59240 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nphp4P59240 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Nphp4P59240 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Nphp4P59240 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nphp4P59240 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nphp4P59240 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC20.31■□□□□ 0.84
Nphp4P59240 Gm9726-201ENSMUST00000180321 678 ntBASIC20.31■□□□□ 0.84
Nphp4P59240 Mir8102-201ENSMUST00000184148 139 ntBASIC20.31■□□□□ 0.84
Nphp4P59240 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nphp4P59240 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nphp4P59240 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nphp4P59240 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nphp4P59240 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nphp4P59240 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nphp4P59240 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp4P59240 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC20.3■□□□□ 0.84
Nphp4P59240 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp4P59240 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp4P59240 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC20.3■□□□□ 0.84
Nphp4P59240 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC20.3■□□□□ 0.84
Nphp4P59240 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp4P59240 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Nphp4P59240 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp4P59240 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp4P59240 Gm6222-201ENSMUST00000120787 396 ntBASIC20.3■□□□□ 0.84
Nphp4P59240 Gm15487-201ENSMUST00000122373 465 ntBASIC20.3■□□□□ 0.84
Nphp4P59240 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Nphp4P59240 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp4P59240 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp4P59240 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp4P59240 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp4P59240 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp4P59240 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC20.3■□□□□ 0.84
Nphp4P59240 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Nphp4P59240 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp4P59240 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp4P59240 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp4P59240 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
Nphp4P59240 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp4P59240 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp4P59240 Gm42901-201ENSMUST00000197735 3171 ntBASIC20.3■□□□□ 0.84
Nphp4P59240 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nphp4P59240 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Nphp4P59240 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Nphp4P59240 Gm14719-201ENSMUST00000121891 340 ntBASIC20.29■□□□□ 0.84
Nphp4P59240 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC20.29■□□□□ 0.84
Nphp4P59240 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp4P59240 Gm16476-201ENSMUST00000221544 139 ntBASIC20.29■□□□□ 0.84
Nphp4P59240 AC090659.2-201ENSMUST00000225378 1186 ntBASIC20.29■□□□□ 0.84
Nphp4P59240 AC132863.2-201ENSMUST00000226643 799 ntBASIC20.29■□□□□ 0.84
Nphp4P59240 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp4P59240 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC20.29■□□□□ 0.84
Nphp4P59240 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp4P59240 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp4P59240 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp4P59240 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Nphp4P59240 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp4P59240 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp4P59240 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp4P59240 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nphp4P59240 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp4P59240 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Nphp4P59240 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp4P59240 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Nphp4P59240 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp4P59240 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nphp4P59240 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Nphp4P59240 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC20.28■□□□□ 0.84
Nphp4P59240 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp4P59240 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp4P59240 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp4P59240 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Nphp4P59240 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp4P59240 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nphp4P59240 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Nphp4P59240 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms