Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nup43P59235 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.28□□□□□ -0.12
Nup43P59235 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nup43P59235 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup43P59235 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nup43P59235 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup43P59235 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nup43P59235 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup43P59235 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup43P59235 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.27□□□□□ -0.12
Nup43P59235 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Nup43P59235 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup43P59235 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nup43P59235 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nup43P59235 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nup43P59235 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.27□□□□□ -0.13
Nup43P59235 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.27□□□□□ -0.13
Nup43P59235 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nup43P59235 AW822252-206ENSMUST00000208904 237 ntBASIC14.27□□□□□ -0.13
Nup43P59235 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup43P59235 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup43P59235 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup43P59235 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup43P59235 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup43P59235 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup43P59235 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup43P59235 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup43P59235 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup43P59235 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.27□□□□□ -0.13
Nup43P59235 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup43P59235 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nup43P59235 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nup43P59235 Celf4-206ENSMUST00000224553 1729 ntBASIC14.27□□□□□ -0.13
Nup43P59235 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.26□□□□□ -0.13
Nup43P59235 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Nup43P59235 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nup43P59235 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nup43P59235 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Nup43P59235 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.26□□□□□ -0.13
Nup43P59235 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Nup43P59235 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.26□□□□□ -0.13
Nup43P59235 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Nup43P59235 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nup43P59235 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Nup43P59235 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Gm12260-201ENSMUST00000122447 411 ntBASIC14.25□□□□□ -0.13
Nup43P59235 Gm9727-201ENSMUST00000161387 555 ntBASIC14.25□□□□□ -0.13
Nup43P59235 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.25□□□□□ -0.13
Nup43P59235 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Gm43514-201ENSMUST00000198852 424 ntBASIC14.25□□□□□ -0.13
Nup43P59235 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.25□□□□□ -0.13
Nup43P59235 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.25□□□□□ -0.13
Nup43P59235 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.25□□□□□ -0.13
Nup43P59235 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.25□□□□□ -0.13
Nup43P59235 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms