Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm23547-201ENSMUST00000158210 271 ntBASIC17.06■□□□□ 0.32
Rrp1P56183 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp1P56183 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Rrp1P56183 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rrp1P56183 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp1P56183 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp1P56183 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp1P56183 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.06■□□□□ 0.32
Rrp1P56183 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp1P56183 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp1P56183 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp1P56183 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp1P56183 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp1P56183 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp1P56183 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp1P56183 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp1P56183 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp1P56183 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rrp1P56183 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.05■□□□□ 0.32
Rrp1P56183 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Rrp1P56183 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rrp1P56183 Gm9103-201ENSMUST00000119371 405 ntBASIC17.05■□□□□ 0.32
Rrp1P56183 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Rrp1P56183 Gm17807-201ENSMUST00000186869 298 ntBASIC17.05■□□□□ 0.32
Rrp1P56183 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.05■□□□□ 0.32
Rrp1P56183 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.05■□□□□ 0.32
Rrp1P56183 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.05■□□□□ 0.32
Rrp1P56183 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.05■□□□□ 0.32
Rrp1P56183 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rrp1P56183 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp1P56183 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Rrp1P56183 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rrp1P56183 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Rrp1P56183 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.04■□□□□ 0.32
Rrp1P56183 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.04■□□□□ 0.32
Rrp1P56183 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.04■□□□□ 0.32
Rrp1P56183 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.04■□□□□ 0.32
Rrp1P56183 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Carlr-201ENSMUST00000181515 2574 ntBASIC17.04■□□□□ 0.32
Rrp1P56183 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Rrp1P56183 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp1P56183 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp1P56183 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp1P56183 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.03■□□□□ 0.32
Rrp1P56183 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp1P56183 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp1P56183 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp1P56183 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp1P56183 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp1P56183 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp1P56183 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp1P56183 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rrp1P56183 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp1P56183 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp1P56183 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp1P56183 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.03■□□□□ 0.32
Rrp1P56183 Gm8097-201ENSMUST00000117903 829 ntBASIC17.03■□□□□ 0.32
Rrp1P56183 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.03■□□□□ 0.32
Rrp1P56183 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.03■□□□□ 0.32
Rrp1P56183 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.03■□□□□ 0.32
Rrp1P56183 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.03■□□□□ 0.32
Rrp1P56183 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms