Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.12■□□□□ 0.01
Fdft1P53798 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.12■□□□□ 0.01
Fdft1P53798 Gm4535-201ENSMUST00000182274 558 ntBASIC15.12■□□□□ 0.01
Fdft1P53798 Gm44357-201ENSMUST00000195897 142 ntBASIC15.12■□□□□ 0.01
Fdft1P53798 Gm19658-201ENSMUST00000196231 138 ntBASIC15.12■□□□□ 0.01
Fdft1P53798 Gm44367-201ENSMUST00000196836 138 ntBASIC15.12■□□□□ 0.01
Fdft1P53798 Gm44350-201ENSMUST00000197197 138 ntBASIC15.12■□□□□ 0.01
Fdft1P53798 Gm44390-201ENSMUST00000197533 144 ntBASIC15.12■□□□□ 0.01
Fdft1P53798 Gm44313-201ENSMUST00000198018 138 ntBASIC15.12■□□□□ 0.01
Fdft1P53798 Gm44486-201ENSMUST00000198508 138 ntBASIC15.12■□□□□ 0.01
Fdft1P53798 Gm44314-201ENSMUST00000199263 138 ntBASIC15.12■□□□□ 0.01
Fdft1P53798 Gm44394-201ENSMUST00000199558 138 ntBASIC15.12■□□□□ 0.01
Fdft1P53798 Gm44484-201ENSMUST00000199873 138 ntBASIC15.12■□□□□ 0.01
Fdft1P53798 Gm44466-201ENSMUST00000200264 138 ntBASIC15.12■□□□□ 0.01
Fdft1P53798 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.12■□□□□ 0.01
Fdft1P53798 Gm44359-201ENSMUST00000200671 138 ntBASIC15.12■□□□□ 0.01
Fdft1P53798 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.12■□□□□ 0.01
Fdft1P53798 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.12■□□□□ 0.01
Fdft1P53798 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.12■□□□□ 0.01
Fdft1P53798 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fdft1P53798 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fdft1P53798 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fdft1P53798 Gm10355-201ENSMUST00000097146 517 ntBASIC15.12■□□□□ 0.01
Fdft1P53798 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fdft1P53798 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Fdft1P53798 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.12■□□□□ 0.01
Fdft1P53798 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fdft1P53798 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fdft1P53798 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fdft1P53798 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fdft1P53798 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fdft1P53798 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Fdft1P53798 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fdft1P53798 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fdft1P53798 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
Fdft1P53798 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fdft1P53798 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.11■□□□□ 0.01
Fdft1P53798 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fdft1P53798 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fdft1P53798 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fdft1P53798 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.11■□□□□ 0.01
Fdft1P53798 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fdft1P53798 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Fdft1P53798 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.11■□□□□ 0.01
Fdft1P53798 Gm11780-201ENSMUST00000136880 516 ntBASIC15.11■□□□□ 0.01
Fdft1P53798 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.11■□□□□ 0.01
Fdft1P53798 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Fdft1P53798 Gm27459-201ENSMUST00000184860 107 ntBASIC15.11■□□□□ 0.01
Fdft1P53798 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fdft1P53798 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fdft1P53798 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fdft1P53798 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fdft1P53798 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fdft1P53798 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fdft1P53798 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Fdft1P53798 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Fdft1P53798 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.1■□□□□ 0.01
Fdft1P53798 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Fdft1P53798 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.1■□□□□ 0.01
Fdft1P53798 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.1■□□□□ 0.01
Fdft1P53798 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.1■□□□□ 0.01
Fdft1P53798 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Fdft1P53798 Gm27646-201ENSMUST00000183989 110 ntBASIC15.1■□□□□ 0.01
Fdft1P53798 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.1■□□□□ 0.01
Fdft1P53798 Gm6296-201ENSMUST00000222599 943 ntBASIC15.1■□□□□ 0.01
Fdft1P53798 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Fdft1P53798 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Fdft1P53798 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fdft1P53798 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fdft1P53798 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Fdft1P53798 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fdft1P53798 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fdft1P53798 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fdft1P53798 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fdft1P53798 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Fdft1P53798 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.09■□□□□ 0.01
Fdft1P53798 Gm13418-201ENSMUST00000119097 944 ntBASIC15.09■□□□□ 0.01
Fdft1P53798 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.09■□□□□ 0.01
Fdft1P53798 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms