Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sox2P48432 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sox2P48432 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.19□□□□□ -0.14
Sox2P48432 Gm13312-201ENSMUST00000119631 718 ntBASIC14.19□□□□□ -0.14
Sox2P48432 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Gm5587-201ENSMUST00000206270 674 ntBASIC14.19□□□□□ -0.14
Sox2P48432 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.19□□□□□ -0.14
Sox2P48432 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.19□□□□□ -0.14
Sox2P48432 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.19□□□□□ -0.14
Sox2P48432 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sox2P48432 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sox2P48432 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Sox2P48432 Gm11950-201ENSMUST00000121615 838 ntBASIC14.18□□□□□ -0.14
Sox2P48432 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.18□□□□□ -0.14
Sox2P48432 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Sox2P48432 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Sox2P48432 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sox2P48432 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox2P48432 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox2P48432 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox2P48432 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sox2P48432 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox2P48432 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox2P48432 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.17□□□□□ -0.14
Sox2P48432 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox2P48432 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox2P48432 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox2P48432 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sox2P48432 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox2P48432 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sox2P48432 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox2P48432 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Sox2P48432 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Sox2P48432 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox2P48432 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sox2P48432 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox2P48432 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.17□□□□□ -0.14
Sox2P48432 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.17□□□□□ -0.14
Sox2P48432 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.17□□□□□ -0.14
Sox2P48432 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox2P48432 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.17□□□□□ -0.14
Sox2P48432 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sox2P48432 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox2P48432 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox2P48432 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.17□□□□□ -0.14
Sox2P48432 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox2P48432 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sox2P48432 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sox2P48432 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox2P48432 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms