Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1dP43277 Grk6-207ENSMUST00000225925 2769 ntBASIC12.81□□□□□ -0.36
Hist1h1dP43277 Celf4-206ENSMUST00000224553 1729 ntBASIC12.81□□□□□ -0.36
Hist1h1dP43277 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1dP43277 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1dP43277 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Hist1h1dP43277 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.81□□□□□ -0.36
Hist1h1dP43277 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.81□□□□□ -0.36
Hist1h1dP43277 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1dP43277 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1dP43277 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1dP43277 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1dP43277 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist1h1dP43277 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.81□□□□□ -0.36
Hist1h1dP43277 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.81□□□□□ -0.36
Hist1h1dP43277 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.8□□□□□ -0.36
Hist1h1dP43277 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Olfr129-201ENSMUST00000122318 993 ntBASIC12.8□□□□□ -0.36
Hist1h1dP43277 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hist1h1dP43277 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.79□□□□□ -0.36
Hist1h1dP43277 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Hist1h1dP43277 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.79□□□□□ -0.36
Hist1h1dP43277 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.79□□□□□ -0.36
Hist1h1dP43277 Gm4459-201ENSMUST00000118750 468 ntBASIC12.79□□□□□ -0.36
Hist1h1dP43277 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.79□□□□□ -0.36
Hist1h1dP43277 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hist1h1dP43277 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.78□□□□□ -0.36
Hist1h1dP43277 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1dP43277 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1dP43277 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1dP43277 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1dP43277 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1dP43277 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1dP43277 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hist1h1dP43277 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.78□□□□□ -0.36
Hist1h1dP43277 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.78□□□□□ -0.36
Hist1h1dP43277 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hist1h1dP43277 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms