Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Cdx2P43241 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cdx2P43241 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.29□□□□□ -0.12
Cdx2P43241 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Gm27680-201ENSMUST00000184192 160 ntBASIC14.29□□□□□ -0.12
Cdx2P43241 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.29□□□□□ -0.12
Cdx2P43241 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.29□□□□□ -0.12
Cdx2P43241 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cdx2P43241 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cdx2P43241 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cdx2P43241 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdx2P43241 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.29□□□□□ -0.12
Cdx2P43241 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cdx2P43241 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Cdx2P43241 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdx2P43241 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx2P43241 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cdx2P43241 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx2P43241 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cdx2P43241 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx2P43241 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx2P43241 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx2P43241 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Cdx2P43241 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx2P43241 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdx2P43241 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.28□□□□□ -0.12
Cdx2P43241 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx2P43241 Gm27838-201ENSMUST00000184829 128 ntBASIC14.28□□□□□ -0.12
Cdx2P43241 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx2P43241 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.28□□□□□ -0.12
Cdx2P43241 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdx2P43241 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx2P43241 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx2P43241 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx2P43241 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx2P43241 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx2P43241 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cdx2P43241 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx2P43241 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx2P43241 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx2P43241 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cdx2P43241 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdx2P43241 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cdx2P43241 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdx2P43241 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cdx2P43241 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
Cdx2P43241 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.27□□□□□ -0.12
Cdx2P43241 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.27□□□□□ -0.12
Cdx2P43241 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdx2P43241 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdx2P43241 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cdx2P43241 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdx2P43241 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdx2P43241 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cdx2P43241 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdx2P43241 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cdx2P43241 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.27□□□□□ -0.12
Cdx2P43241 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cdx2P43241 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cdx2P43241 Gm43767-201ENSMUST00000198933 381 ntBASIC14.27□□□□□ -0.13
Cdx2P43241 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.27□□□□□ -0.13
Cdx2P43241 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdx2P43241 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdx2P43241 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.27□□□□□ -0.13
Cdx2P43241 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Cdx2P43241 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdx2P43241 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdx2P43241 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Cdx2P43241 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdx2P43241 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Cdx2P43241 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdx2P43241 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdx2P43241 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cdx2P43241 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdx2P43241 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdx2P43241 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cdx2P43241 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdx2P43241 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdx2P43241 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdx2P43241 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms