Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HttP42859 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HttP42859 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HttP42859 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HttP42859 Gm37259-201ENSMUST00000193903 849 ntBASIC15.88■□□□□ 0.13
HttP42859 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HttP42859 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HttP42859 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HttP42859 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HttP42859 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HttP42859 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HttP42859 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HttP42859 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HttP42859 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HttP42859 Gm43118-201ENSMUST00000199149 775 ntBASIC15.87■□□□□ 0.13
HttP42859 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HttP42859 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HttP42859 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HttP42859 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HttP42859 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.87■□□□□ 0.13
HttP42859 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HttP42859 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HttP42859 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HttP42859 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.87■□□□□ 0.13
HttP42859 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HttP42859 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HttP42859 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HttP42859 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HttP42859 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HttP42859 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.87■□□□□ 0.13
HttP42859 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
HttP42859 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HttP42859 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
HttP42859 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HttP42859 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HttP42859 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
HttP42859 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HttP42859 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HttP42859 Gm27514-201ENSMUST00000183692 110 ntBASIC15.86■□□□□ 0.13
HttP42859 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HttP42859 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.86■□□□□ 0.13
HttP42859 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HttP42859 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
HttP42859 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
HttP42859 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HttP42859 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HttP42859 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HttP42859 Mir125a-201ENSMUST00000083545 68 ntBASIC15.86■□□□□ 0.13
HttP42859 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HttP42859 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.86■□□□□ 0.13
HttP42859 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HttP42859 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HttP42859 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HttP42859 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.85■□□□□ 0.13
HttP42859 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.85■□□□□ 0.13
HttP42859 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HttP42859 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.85■□□□□ 0.13
HttP42859 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.85■□□□□ 0.13
HttP42859 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HttP42859 Gm10012-201ENSMUST00000078252 192 ntBASIC15.85■□□□□ 0.13
HttP42859 Gm24526-201ENSMUST00000082921 158 ntBASIC15.85■□□□□ 0.13
HttP42859 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HttP42859 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HttP42859 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HttP42859 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HttP42859 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HttP42859 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HttP42859 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HttP42859 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.85■□□□□ 0.13
HttP42859 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HttP42859 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HttP42859 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
HttP42859 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HttP42859 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HttP42859 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.85■□□□□ 0.13
HttP42859 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.85■□□□□ 0.13
HttP42859 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HttP42859 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HttP42859 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
HttP42859 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HttP42859 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
HttP42859 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HttP42859 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HttP42859 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HttP42859 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.84■□□□□ 0.13
HttP42859 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HttP42859 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HttP42859 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.84■□□□□ 0.13
HttP42859 Gm11814-201ENSMUST00000119515 929 ntBASIC15.84■□□□□ 0.13
HttP42859 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.84■□□□□ 0.13
HttP42859 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HttP42859 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.84■□□□□ 0.13
HttP42859 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HttP42859 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.84■□□□□ 0.13
HttP42859 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HttP42859 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HttP42859 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HttP42859 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HttP42859 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HttP42859 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms