Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd27P41272 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd27P41272 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd27P41272 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd27P41272 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd27P41272 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cd27P41272 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd27P41272 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd27P41272 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd27P41272 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd27P41272 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cd27P41272 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cd27P41272 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.09□□□□□ -0.47
Cd27P41272 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Cd27P41272 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.09□□□□□ -0.47
Cd27P41272 Gm12260-201ENSMUST00000122447 411 ntBASIC12.09□□□□□ -0.47
Cd27P41272 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.09□□□□□ -0.47
Cd27P41272 Gm43767-201ENSMUST00000198933 381 ntBASIC12.09□□□□□ -0.47
Cd27P41272 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cd27P41272 Gm45747-201ENSMUST00000212203 999 ntBASIC12.09□□□□□ -0.47
Cd27P41272 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cd27P41272 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Cd27P41272 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cd27P41272 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd27P41272 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cd27P41272 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.09□□□□□ -0.47
Cd27P41272 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cd27P41272 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Cd27P41272 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cd27P41272 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd27P41272 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd27P41272 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Cd27P41272 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd27P41272 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Cd27P41272 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd27P41272 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Cd27P41272 Gm4995-201ENSMUST00000117247 432 ntBASIC12.08□□□□□ -0.48
Cd27P41272 Gm12008-201ENSMUST00000117791 755 ntBASIC12.08□□□□□ -0.48
Cd27P41272 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.08□□□□□ -0.48
Cd27P41272 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.08□□□□□ -0.48
Cd27P41272 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd27P41272 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd27P41272 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd27P41272 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.08□□□□□ -0.48
Cd27P41272 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.08□□□□□ -0.48
Cd27P41272 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd27P41272 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.08□□□□□ -0.48
Cd27P41272 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.08□□□□□ -0.48
Cd27P41272 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd27P41272 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd27P41272 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.08□□□□□ -0.48
Cd27P41272 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd27P41272 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd27P41272 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cd27P41272 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cd27P41272 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd27P41272 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cd27P41272 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd27P41272 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cd27P41272 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd27P41272 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd27P41272 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd27P41272 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd27P41272 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd27P41272 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cd27P41272 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd27P41272 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd27P41272 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd27P41272 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd27P41272 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd27P41272 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cd27P41272 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Cd27P41272 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cd27P41272 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cd27P41272 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.07□□□□□ -0.48
Cd27P41272 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.07□□□□□ -0.48
Cd27P41272 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms