Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox6P40645 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox6P40645 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sox6P40645 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox6P40645 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox6P40645 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sox6P40645 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sox6P40645 Gm12644-201ENSMUST00000119935 606 ntBASIC14.22□□□□□ -0.13
Sox6P40645 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox6P40645 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox6P40645 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox6P40645 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox6P40645 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Sox6P40645 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sox6P40645 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox6P40645 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox6P40645 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox6P40645 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox6P40645 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox6P40645 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox6P40645 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox6P40645 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.21□□□□□ -0.13
Sox6P40645 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox6P40645 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox6P40645 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox6P40645 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox6P40645 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.21□□□□□ -0.13
Sox6P40645 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox6P40645 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox6P40645 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox6P40645 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Sox6P40645 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sox6P40645 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox6P40645 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Sox6P40645 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Sox6P40645 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.21□□□□□ -0.13
Sox6P40645 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.21□□□□□ -0.13
Sox6P40645 Gm25745-201ENSMUST00000174945 133 ntBASIC14.21□□□□□ -0.13
Sox6P40645 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox6P40645 Gm9172-201ENSMUST00000212092 954 ntBASIC14.21□□□□□ -0.13
Sox6P40645 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox6P40645 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox6P40645 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox6P40645 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Sox6P40645 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.21□□□□□ -0.13
Sox6P40645 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox6P40645 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox6P40645 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox6P40645 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox6P40645 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sox6P40645 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Sox6P40645 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Sox6P40645 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox6P40645 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Sox6P40645 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Sox6P40645 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.21□□□□□ -0.14
Sox6P40645 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Sox6P40645 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Sox6P40645 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox6P40645 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
Sox6P40645 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.21□□□□□ -0.14
Sox6P40645 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sox6P40645 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.2□□□□□ -0.14
Sox6P40645 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.2□□□□□ -0.14
Sox6P40645 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox6P40645 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Sox6P40645 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.2□□□□□ -0.14
Sox6P40645 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Sox6P40645 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sox6P40645 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Sox6P40645 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox6P40645 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Sox6P40645 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox6P40645 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox6P40645 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Sox6P40645 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sox6P40645 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sox6P40645 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms