Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Timp3P39876 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Timp3P39876 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Timp3P39876 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Timp3P39876 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.4□□□□□ -0.42
Timp3P39876 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Timp3P39876 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Timp3P39876 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Timp3P39876 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Timp3P39876 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Timp3P39876 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.4□□□□□ -0.42
Timp3P39876 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.4□□□□□ -0.42
Timp3P39876 Mir3113-201ENSMUST00000175478 76 ntBASIC12.4□□□□□ -0.42
Timp3P39876 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.4□□□□□ -0.42
Timp3P39876 Gm45167-201ENSMUST00000208007 322 ntBASIC12.4□□□□□ -0.42
Timp3P39876 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.4□□□□□ -0.42
Timp3P39876 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Timp3P39876 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Timp3P39876 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Timp3P39876 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Timp3P39876 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Timp3P39876 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Timp3P39876 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.4□□□□□ -0.43
Timp3P39876 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Timp3P39876 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Timp3P39876 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Timp3P39876 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Timp3P39876 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.39□□□□□ -0.43
Timp3P39876 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.39□□□□□ -0.43
Timp3P39876 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.39□□□□□ -0.43
Timp3P39876 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Timp3P39876 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.39□□□□□ -0.43
Timp3P39876 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Timp3P39876 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Timp3P39876 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Timp3P39876 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Timp3P39876 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Timp3P39876 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms