Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col18a1P39061 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Col18a1P39061 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col18a1P39061 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.76■□□□□ 0.75
Col18a1P39061 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
Col18a1P39061 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col18a1P39061 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col18a1P39061 Gm27572-201ENSMUST00000183702 255 ntBASIC19.76■□□□□ 0.75
Col18a1P39061 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC19.76■□□□□ 0.75
Col18a1P39061 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Col18a1P39061 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col18a1P39061 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
Col18a1P39061 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col18a1P39061 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col18a1P39061 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col18a1P39061 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col18a1P39061 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col18a1P39061 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col18a1P39061 Gm5940-201ENSMUST00000117582 1068 ntBASIC19.75■□□□□ 0.75
Col18a1P39061 Gm8749-201ENSMUST00000117737 331 ntBASIC19.75■□□□□ 0.75
Col18a1P39061 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col18a1P39061 AC159747.1-201ENSMUST00000219903 265 ntBASIC19.75■□□□□ 0.75
Col18a1P39061 AC126253.1-201ENSMUST00000227974 824 ntBASIC19.75■□□□□ 0.75
Col18a1P39061 Gm7399-201ENSMUST00000032395 858 ntBASIC19.75■□□□□ 0.75
Col18a1P39061 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col18a1P39061 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col18a1P39061 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.75■□□□□ 0.75
Col18a1P39061 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Col18a1P39061 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Col18a1P39061 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col18a1P39061 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC19.75■□□□□ 0.75
Col18a1P39061 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col18a1P39061 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.75■□□□□ 0.75
Col18a1P39061 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col18a1P39061 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Col18a1P39061 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col18a1P39061 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col18a1P39061 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC19.75■□□□□ 0.75
Col18a1P39061 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col18a1P39061 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC19.75■□□□□ 0.75
Col18a1P39061 Gm42442-201ENSMUST00000197951 1133 ntBASIC19.75■□□□□ 0.75
Col18a1P39061 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC19.75■□□□□ 0.75
Col18a1P39061 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC19.75■□□□□ 0.75
Col18a1P39061 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col18a1P39061 Gm9182-201ENSMUST00000217829 639 ntBASIC19.75■□□□□ 0.75
Col18a1P39061 AC155258.1-201ENSMUST00000219303 253 ntBASIC19.75■□□□□ 0.75
Col18a1P39061 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col18a1P39061 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Col18a1P39061 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col18a1P39061 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.75■□□□□ 0.75
Col18a1P39061 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col18a1P39061 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col18a1P39061 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col18a1P39061 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col18a1P39061 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col18a1P39061 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col18a1P39061 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col18a1P39061 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col18a1P39061 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC19.74■□□□□ 0.75
Col18a1P39061 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col18a1P39061 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC19.74■□□□□ 0.75
Col18a1P39061 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col18a1P39061 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col18a1P39061 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col18a1P39061 Dancr-204ENSMUST00000132389 2347 ntBASIC19.74■□□□□ 0.75
Col18a1P39061 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col18a1P39061 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col18a1P39061 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col18a1P39061 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Col18a1P39061 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col18a1P39061 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col18a1P39061 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col18a1P39061 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
Col18a1P39061 Gm10275-202ENSMUST00000168697 495 ntBASIC19.73■□□□□ 0.75
Col18a1P39061 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC19.73■□□□□ 0.75
Col18a1P39061 Ighv1-25-201ENSMUST00000195638 345 ntBASIC19.73■□□□□ 0.75
Col18a1P39061 Gm10275-201ENSMUST00000092620 635 ntBASIC19.73■□□□□ 0.75
Col18a1P39061 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col18a1P39061 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col18a1P39061 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Col18a1P39061 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Col18a1P39061 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col18a1P39061 Gm15236-201ENSMUST00000117309 379 ntBASIC19.72■□□□□ 0.75
Col18a1P39061 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC19.72■□□□□ 0.75
Col18a1P39061 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC19.72■□□□□ 0.75
Col18a1P39061 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC19.72■□□□□ 0.75
Col18a1P39061 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col18a1P39061 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Col18a1P39061 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Col18a1P39061 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col18a1P39061 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col18a1P39061 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC19.72■□□□□ 0.75
Col18a1P39061 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col18a1P39061 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC19.72■□□□□ 0.75
Col18a1P39061 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Col18a1P39061 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC19.72■□□□□ 0.75
Col18a1P39061 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col18a1P39061 Trav13-3-201ENSMUST00000117226 336 ntBASIC19.72■□□□□ 0.75
Col18a1P39061 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC19.72■□□□□ 0.75
Col18a1P39061 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms