Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.04■□□□□ -0
PdgfbP31240 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.04■□□□□ -0
PdgfbP31240 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.04■□□□□ -0
PdgfbP31240 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PdgfbP31240 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PdgfbP31240 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.04■□□□□ -0
PdgfbP31240 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PdgfbP31240 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PdgfbP31240 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PdgfbP31240 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PdgfbP31240 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PdgfbP31240 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.04■□□□□ -0
PdgfbP31240 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.04■□□□□ -0
PdgfbP31240 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.04■□□□□ -0
PdgfbP31240 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.04■□□□□ -0
PdgfbP31240 Gm16476-201ENSMUST00000221544 139 ntBASIC15.04■□□□□ -0
PdgfbP31240 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PdgfbP31240 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.04■□□□□ -0
PdgfbP31240 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.04■□□□□ -0
PdgfbP31240 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PdgfbP31240 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.04■□□□□ -0
PdgfbP31240 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PdgfbP31240 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.04■□□□□ -0
PdgfbP31240 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PdgfbP31240 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PdgfbP31240 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.04■□□□□ -0
PdgfbP31240 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PdgfbP31240 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PdgfbP31240 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PdgfbP31240 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PdgfbP31240 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PdgfbP31240 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PdgfbP31240 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PdgfbP31240 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PdgfbP31240 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PdgfbP31240 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.03■□□□□ -0
PdgfbP31240 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PdgfbP31240 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
PdgfbP31240 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.03■□□□□ -0
PdgfbP31240 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PdgfbP31240 Gm5479-201ENSMUST00000160578 435 ntBASIC15.03■□□□□ -0
PdgfbP31240 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PdgfbP31240 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.03■□□□□ -0
PdgfbP31240 Dupd1-202ENSMUST00000224735 548 ntBASIC15.03■□□□□ -0
PdgfbP31240 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PdgfbP31240 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.03■□□□□ -0
PdgfbP31240 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PdgfbP31240 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PdgfbP31240 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.03■□□□□ -0
PdgfbP31240 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PdgfbP31240 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PdgfbP31240 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PdgfbP31240 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.02■□□□□ -0
PdgfbP31240 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.02■□□□□ -0
PdgfbP31240 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PdgfbP31240 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PdgfbP31240 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PdgfbP31240 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PdgfbP31240 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
PdgfbP31240 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.02■□□□□ -0
PdgfbP31240 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PdgfbP31240 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PdgfbP31240 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PdgfbP31240 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PdgfbP31240 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.02■□□□□ -0
PdgfbP31240 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.02■□□□□ -0
PdgfbP31240 Gm15824-201ENSMUST00000119516 955 ntBASIC15.02■□□□□ -0
PdgfbP31240 Gm10766-202ENSMUST00000194123 606 ntBASIC15.02■□□□□ -0
PdgfbP31240 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PdgfbP31240 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.02■□□□□ -0
PdgfbP31240 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PdgfbP31240 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PdgfbP31240 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.02■□□□□ -0
PdgfbP31240 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PdgfbP31240 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PdgfbP31240 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PdgfbP31240 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PdgfbP31240 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PdgfbP31240 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.02□□□□□ -0.01
PdgfbP31240 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PdgfbP31240 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PdgfbP31240 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PdgfbP31240 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PdgfbP31240 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdgfbP31240 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdgfbP31240 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdgfbP31240 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.01□□□□□ -0.01
PdgfbP31240 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdgfbP31240 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdgfbP31240 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdgfbP31240 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdgfbP31240 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.01□□□□□ -0.01
PdgfbP31240 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdgfbP31240 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdgfbP31240 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.01□□□□□ -0.01
PdgfbP31240 Gm11918-201ENSMUST00000121660 179 ntBASIC15.01□□□□□ -0.01
PdgfbP31240 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PdgfbP31240 Gm17150-201ENSMUST00000165577 381 ntBASIC15.01□□□□□ -0.01
PdgfbP31240 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdgfbP31240 Gm3436-201ENSMUST00000179930 840 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms