Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
BgnP28653 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
BgnP28653 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
BgnP28653 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.03□□□□□ -0.16
BgnP28653 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.03□□□□□ -0.16
BgnP28653 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.03□□□□□ -0.16
BgnP28653 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.03□□□□□ -0.16
BgnP28653 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
BgnP28653 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
BgnP28653 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.03□□□□□ -0.16
BgnP28653 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
BgnP28653 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BgnP28653 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BgnP28653 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BgnP28653 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BgnP28653 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
BgnP28653 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BgnP28653 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BgnP28653 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BgnP28653 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.02□□□□□ -0.16
BgnP28653 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BgnP28653 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BgnP28653 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BgnP28653 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BgnP28653 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.02□□□□□ -0.16
BgnP28653 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BgnP28653 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BgnP28653 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BgnP28653 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.02□□□□□ -0.17
BgnP28653 Gm13436-201ENSMUST00000120418 567 ntBASIC14.02□□□□□ -0.17
BgnP28653 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
BgnP28653 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.02□□□□□ -0.17
BgnP28653 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.02□□□□□ -0.17
BgnP28653 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.02□□□□□ -0.17
BgnP28653 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BgnP28653 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BgnP28653 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BgnP28653 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
BgnP28653 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BgnP28653 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BgnP28653 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
BgnP28653 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.02□□□□□ -0.17
BgnP28653 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BgnP28653 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BgnP28653 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
BgnP28653 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
BgnP28653 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
BgnP28653 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BgnP28653 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BgnP28653 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
BgnP28653 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BgnP28653 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BgnP28653 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BgnP28653 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BgnP28653 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
BgnP28653 Mir5130-201ENSMUST00000175160 84 ntBASIC14.01□□□□□ -0.17
BgnP28653 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
BgnP28653 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.01□□□□□ -0.17
BgnP28653 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BgnP28653 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BgnP28653 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
BgnP28653 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
BgnP28653 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
BgnP28653 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.01□□□□□ -0.17
BgnP28653 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BgnP28653 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
BgnP28653 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
BgnP28653 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
BgnP28653 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BgnP28653 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14□□□□□ -0.17
BgnP28653 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BgnP28653 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
BgnP28653 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BgnP28653 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BgnP28653 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
BgnP28653 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14□□□□□ -0.17
BgnP28653 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BgnP28653 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
BgnP28653 Gm27011-201ENSMUST00000182352 972 ntBASIC14□□□□□ -0.17
BgnP28653 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14□□□□□ -0.17
BgnP28653 AC159205.6-201ENSMUST00000224935 887 ntBASIC14□□□□□ -0.17
BgnP28653 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms