Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Gm27646-201ENSMUST00000183989 110 ntBASIC13.95□□□□□ -0.18
Cd40lgP27548 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.95□□□□□ -0.18
Cd40lgP27548 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.95□□□□□ -0.18
Cd40lgP27548 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cd40lgP27548 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.95□□□□□ -0.18
Cd40lgP27548 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cd40lgP27548 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cd40lgP27548 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cd40lgP27548 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Cd40lgP27548 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.94□□□□□ -0.18
Cd40lgP27548 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.94□□□□□ -0.18
Cd40lgP27548 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cd40lgP27548 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.94□□□□□ -0.18
Cd40lgP27548 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Cd40lgP27548 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.93□□□□□ -0.18
Cd40lgP27548 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Gm12350-201ENSMUST00000121208 462 ntBASIC13.93□□□□□ -0.18
Cd40lgP27548 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.93□□□□□ -0.18
Cd40lgP27548 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Gm37153-201ENSMUST00000193637 231 ntBASIC13.93□□□□□ -0.18
Cd40lgP27548 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.93□□□□□ -0.18
Cd40lgP27548 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cd40lgP27548 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Cd40lgP27548 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.93□□□□□ -0.18
Cd40lgP27548 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.93□□□□□ -0.18
Cd40lgP27548 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cd40lgP27548 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cd40lgP27548 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cd40lgP27548 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
Cd40lgP27548 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.92□□□□□ -0.18
Cd40lgP27548 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cd40lgP27548 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Gm11764-201ENSMUST00000120221 623 ntBASIC13.92□□□□□ -0.18
Cd40lgP27548 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.92□□□□□ -0.18
Cd40lgP27548 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cd40lgP27548 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.92□□□□□ -0.18
Cd40lgP27548 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cd40lgP27548 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms