Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col8a2P25318 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col8a2P25318 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.61□□□□□ -0.39
Col8a2P25318 Gm13365-201ENSMUST00000121188 973 ntBASIC12.61□□□□□ -0.39
Col8a2P25318 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Col8a2P25318 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.61□□□□□ -0.39
Col8a2P25318 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.61□□□□□ -0.39
Col8a2P25318 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.61□□□□□ -0.39
Col8a2P25318 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.61□□□□□ -0.39
Col8a2P25318 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Col8a2P25318 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col8a2P25318 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.6□□□□□ -0.39
Col8a2P25318 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.6□□□□□ -0.39
Col8a2P25318 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Col8a2P25318 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Col8a2P25318 Gm15427-201ENSMUST00000117288 531 ntBASIC12.6□□□□□ -0.39
Col8a2P25318 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.6□□□□□ -0.39
Col8a2P25318 Gm11745-201ENSMUST00000121669 448 ntBASIC12.6□□□□□ -0.39
Col8a2P25318 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.6□□□□□ -0.39
Col8a2P25318 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.6□□□□□ -0.39
Col8a2P25318 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.6□□□□□ -0.39
Col8a2P25318 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.6□□□□□ -0.39
Col8a2P25318 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.6□□□□□ -0.39
Col8a2P25318 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.6□□□□□ -0.39
Col8a2P25318 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Col8a2P25318 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Col8a2P25318 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col8a2P25318 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Col8a2P25318 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col8a2P25318 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col8a2P25318 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col8a2P25318 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col8a2P25318 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col8a2P25318 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col8a2P25318 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col8a2P25318 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col8a2P25318 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col8a2P25318 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col8a2P25318 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col8a2P25318 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col8a2P25318 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.59□□□□□ -0.39
Col8a2P25318 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col8a2P25318 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col8a2P25318 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.59□□□□□ -0.39
Col8a2P25318 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col8a2P25318 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col8a2P25318 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.59□□□□□ -0.39
Col8a2P25318 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.59□□□□□ -0.39
Col8a2P25318 Rpph1-201ENSMUST00000175096 319 ntBASIC12.59□□□□□ -0.39
Col8a2P25318 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.59□□□□□ -0.39
Col8a2P25318 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.59□□□□□ -0.39
Col8a2P25318 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col8a2P25318 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col8a2P25318 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms