Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf9P20334 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Gm44872-201ENSMUST00000207864 420 ntBASIC12.37□□□□□ -0.43
Tnfrsf9P20334 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tnfrsf9P20334 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Gm9172-201ENSMUST00000212092 954 ntBASIC12.36□□□□□ -0.43
Tnfrsf9P20334 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 CT009738.1-201ENSMUST00000219031 809 ntBASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfrsf9P20334 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Gm11025-201ENSMUST00000140773 466 ntBASIC12.35□□□□□ -0.43
Tnfrsf9P20334 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfrsf9P20334 Gm5682-201ENSMUST00000173402 505 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms