Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.26□□□□□ -0.13
TP20293 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Gm10060-201ENSMUST00000212002 111 ntBASIC14.26□□□□□ -0.13
TP20293 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TP20293 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.26□□□□□ -0.13
TP20293 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TP20293 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TP20293 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TP20293 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TP20293 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.26□□□□□ -0.13
TP20293 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TP20293 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.26□□□□□ -0.13
TP20293 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.25□□□□□ -0.13
TP20293 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TP20293 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.25□□□□□ -0.13
TP20293 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TP20293 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.25□□□□□ -0.13
TP20293 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TP20293 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TP20293 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TP20293 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TP20293 Gm7222-201ENSMUST00000117512 906 ntBASIC14.25□□□□□ -0.13
TP20293 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.25□□□□□ -0.13
TP20293 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
TP20293 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TP20293 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TP20293 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.25□□□□□ -0.13
TP20293 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.25□□□□□ -0.13
TP20293 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TP20293 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.25□□□□□ -0.13
TP20293 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.25□□□□□ -0.13
TP20293 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TP20293 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TP20293 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TP20293 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TP20293 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TP20293 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TP20293 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TP20293 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.25□□□□□ -0.13
TP20293 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TP20293 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TP20293 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TP20293 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TP20293 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.24□□□□□ -0.13
TP20293 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
TP20293 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.24□□□□□ -0.13
TP20293 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.24□□□□□ -0.13
TP20293 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TP20293 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
TP20293 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.24□□□□□ -0.13
TP20293 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
TP20293 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TP20293 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.24□□□□□ -0.13
TP20293 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TP20293 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TP20293 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.24□□□□□ -0.13
TP20293 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TP20293 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.23□□□□□ -0.13
TP20293 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
TP20293 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TP20293 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TP20293 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TP20293 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TP20293 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms