Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Hoxc6P10629 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc6P10629 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc6P10629 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc6P10629 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc6P10629 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc6P10629 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Hoxc6P10629 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.7■□□□□ 0.26
Hoxc6P10629 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc6P10629 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc6P10629 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc6P10629 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.7■□□□□ 0.26
Hoxc6P10629 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc6P10629 Gm16215-201ENSMUST00000161990 637 ntBASIC16.7■□□□□ 0.26
Hoxc6P10629 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Hoxc6P10629 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Hoxc6P10629 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc6P10629 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.7■□□□□ 0.26
Hoxc6P10629 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.7■□□□□ 0.26
Hoxc6P10629 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc6P10629 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc6P10629 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Hoxc6P10629 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc6P10629 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc6P10629 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc6P10629 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hoxc6P10629 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.69■□□□□ 0.26
Hoxc6P10629 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc6P10629 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc6P10629 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Hoxc6P10629 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.69■□□□□ 0.26
Hoxc6P10629 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc6P10629 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.69■□□□□ 0.26
Hoxc6P10629 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.69■□□□□ 0.26
Hoxc6P10629 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc6P10629 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.69■□□□□ 0.26
Hoxc6P10629 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.69■□□□□ 0.26
Hoxc6P10629 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc6P10629 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc6P10629 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.69■□□□□ 0.26
Hoxc6P10629 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Hoxc6P10629 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc6P10629 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc6P10629 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc6P10629 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.69■□□□□ 0.26
Hoxc6P10629 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hoxc6P10629 Syt7-205ENSMUST00000224135 1557 ntBASIC16.68■□□□□ 0.26
Hoxc6P10629 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc6P10629 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc6P10629 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc6P10629 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.68■□□□□ 0.26
Hoxc6P10629 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.68■□□□□ 0.26
Hoxc6P10629 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc6P10629 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc6P10629 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Hoxc6P10629 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc6P10629 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc6P10629 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc6P10629 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.68■□□□□ 0.26
Hoxc6P10629 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc6P10629 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc6P10629 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.68■□□□□ 0.26
Hoxc6P10629 Gm43767-201ENSMUST00000198933 381 ntBASIC16.68■□□□□ 0.26
Hoxc6P10629 Gm44855-201ENSMUST00000205725 362 ntBASIC16.68■□□□□ 0.26
Hoxc6P10629 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.68■□□□□ 0.26
Hoxc6P10629 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc6P10629 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc6P10629 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc6P10629 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc6P10629 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc6P10629 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc6P10629 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hoxc6P10629 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.68■□□□□ 0.26
Hoxc6P10629 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Hoxc6P10629 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxc6P10629 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.67■□□□□ 0.26
Hoxc6P10629 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.67■□□□□ 0.26
Hoxc6P10629 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxc6P10629 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hoxc6P10629 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.67■□□□□ 0.26
Hoxc6P10629 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hoxc6P10629 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxc6P10629 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hoxc6P10629 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxc6P10629 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Hoxc6P10629 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxc6P10629 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxc6P10629 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxc6P10629 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hoxc6P10629 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.67■□□□□ 0.26
Hoxc6P10629 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxc6P10629 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxc6P10629 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hoxc6P10629 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxc6P10629 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxc6P10629 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxc6P10629 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hoxc6P10629 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.67■□□□□ 0.26
Hoxc6P10629 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Hoxc6P10629 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms