Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC19.48■□□□□ 0.71
Hoxc9P09633 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Hoxc9P09633 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc9P09633 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc9P09633 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxc9P09633 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Hoxc9P09633 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc9P09633 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.47■□□□□ 0.71
Hoxc9P09633 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc9P09633 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc9P09633 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc9P09633 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc9P09633 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Hoxc9P09633 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc9P09633 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc9P09633 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc9P09633 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Hoxc9P09633 Gm27838-201ENSMUST00000184829 128 ntBASIC19.47■□□□□ 0.71
Hoxc9P09633 Gm44855-201ENSMUST00000205725 362 ntBASIC19.47■□□□□ 0.71
Hoxc9P09633 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.47■□□□□ 0.71
Hoxc9P09633 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc9P09633 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc9P09633 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc9P09633 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Hoxc9P09633 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc9P09633 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc9P09633 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc9P09633 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxc9P09633 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc9P09633 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc9P09633 Gm13464-201ENSMUST00000119418 935 ntBASIC19.46■□□□□ 0.71
Hoxc9P09633 AC090659.2-201ENSMUST00000225378 1186 ntBASIC19.46■□□□□ 0.71
Hoxc9P09633 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc9P09633 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc9P09633 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Hoxc9P09633 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc9P09633 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc9P09633 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc9P09633 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc9P09633 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc9P09633 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc9P09633 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc9P09633 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxc9P09633 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc9P09633 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc9P09633 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC19.45■□□□□ 0.7
Hoxc9P09633 Gm15321-201ENSMUST00000121290 288 ntBASIC19.45■□□□□ 0.7
Hoxc9P09633 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC19.45■□□□□ 0.7
Hoxc9P09633 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc9P09633 AC124732.1-201ENSMUST00000221551 910 ntBASIC19.45■□□□□ 0.7
Hoxc9P09633 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Hoxc9P09633 Gm10313-201ENSMUST00000095320 1002 ntBASIC19.45■□□□□ 0.7
Hoxc9P09633 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc9P09633 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc9P09633 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.45■□□□□ 0.7
Hoxc9P09633 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc9P09633 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc9P09633 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.45■□□□□ 0.7
Hoxc9P09633 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc9P09633 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc9P09633 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc9P09633 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc9P09633 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc9P09633 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc9P09633 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc9P09633 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxc9P09633 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hoxc9P09633 Syt7-205ENSMUST00000224135 1557 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc9P09633 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc9P09633 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc9P09633 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Hoxc9P09633 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc9P09633 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc9P09633 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc9P09633 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Hoxc9P09633 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc9P09633 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc9P09633 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc9P09633 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxc9P09633 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm4691-201ENSMUST00000182339 1000 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm29310-201ENSMUST00000185468 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm21825-201ENSMUST00000185728 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm29109-201ENSMUST00000185895 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm21896-201ENSMUST00000186520 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm21873-201ENSMUST00000186728 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm21794-201ENSMUST00000187056 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm21880-201ENSMUST00000187275 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm21826-201ENSMUST00000187451 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm21198-201ENSMUST00000188393 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm6473-201ENSMUST00000188572 1210 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm21749-201ENSMUST00000189343 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm21901-201ENSMUST00000189568 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm29424-201ENSMUST00000189716 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm28599-201ENSMUST00000189838 694 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm21867-201ENSMUST00000189917 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm29269-201ENSMUST00000190087 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm21722-201ENSMUST00000190153 696 ntBASIC19.44■□□□□ 0.7
Hoxc9P09633 Gm28423-201ENSMUST00000190701 696 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms