Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.83□□□□□ -0.04
Hoxa4P06798 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa4P06798 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.83□□□□□ -0.04
Hoxa4P06798 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa4P06798 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa4P06798 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Hoxa4P06798 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.83□□□□□ -0.04
Hoxa4P06798 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxa4P06798 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.83□□□□□ -0.04
Hoxa4P06798 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.82□□□□□ -0.04
Hoxa4P06798 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Hoxa4P06798 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.82□□□□□ -0.04
Hoxa4P06798 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.82□□□□□ -0.04
Hoxa4P06798 Gm11594-201ENSMUST00000122313 162 ntBASIC14.82□□□□□ -0.04
Hoxa4P06798 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.82□□□□□ -0.04
Hoxa4P06798 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Hoxa4P06798 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Hoxa4P06798 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.82□□□□□ -0.04
Hoxa4P06798 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.82□□□□□ -0.04
Hoxa4P06798 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Hoxa4P06798 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxa4P06798 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.81□□□□□ -0.04
Hoxa4P06798 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.81□□□□□ -0.04
Hoxa4P06798 Gm2213-201ENSMUST00000197485 688 ntBASIC14.81□□□□□ -0.04
Hoxa4P06798 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Hoxa4P06798 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.81□□□□□ -0.04
Hoxa4P06798 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.81□□□□□ -0.04
Hoxa4P06798 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Hoxa4P06798 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Hoxa4P06798 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.81□□□□□ -0.04
Hoxa4P06798 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Hoxa4P06798 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Hoxa4P06798 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Hoxa4P06798 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Hoxa4P06798 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxa4P06798 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.81□□□□□ -0.04
Hoxa4P06798 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Hoxa4P06798 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.8□□□□□ -0.04
Hoxa4P06798 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.8□□□□□ -0.04
Hoxa4P06798 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.8□□□□□ -0.04
Hoxa4P06798 Gm11025-201ENSMUST00000140773 466 ntBASIC14.8□□□□□ -0.04
Hoxa4P06798 Gm24513-201ENSMUST00000174964 138 ntBASIC14.8□□□□□ -0.04
Hoxa4P06798 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Hoxa4P06798 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.8□□□□□ -0.04
Hoxa4P06798 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxa4P06798 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms