Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.3□□□□□ -0.28
P04224 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
P04224 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.3□□□□□ -0.28
P04224 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
P04224 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Gm13559-201ENSMUST00000120476 863 ntBASIC13.29□□□□□ -0.28
P04224 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.29□□□□□ -0.28
P04224 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.29□□□□□ -0.28
P04224 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.29□□□□□ -0.28
P04224 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.29□□□□□ -0.28
P04224 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.29□□□□□ -0.28
P04224 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
P04224 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
P04224 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
P04224 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.29□□□□□ -0.28
P04224 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
P04224 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
P04224 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.29□□□□□ -0.28
P04224 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
P04224 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P04224 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.28□□□□□ -0.28
P04224 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.28□□□□□ -0.28
P04224 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
P04224 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.28□□□□□ -0.28
P04224 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.28□□□□□ -0.28
P04224 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
P04224 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.28□□□□□ -0.28
P04224 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.28□□□□□ -0.28
P04224 Gm18959-201ENSMUST00000208954 655 ntBASIC13.28□□□□□ -0.28
P04224 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.28□□□□□ -0.28
P04224 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
P04224 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.28□□□□□ -0.28
P04224 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
P04224 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
P04224 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04224 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
P04224 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P04224 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
P04224 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms