Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04214 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
P04214 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
P04214 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
P04214 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.71■□□□□ 0.11
P04214 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04214 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.71■□□□□ 0.11
P04214 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04214 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04214 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04214 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04214 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04214 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
P04214 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
P04214 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04214 Gm6222-201ENSMUST00000120787 396 ntBASIC15.71■□□□□ 0.11
P04214 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.71■□□□□ 0.11
P04214 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.71■□□□□ 0.11
P04214 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
P04214 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.71■□□□□ 0.11
P04214 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04214 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.71■□□□□ 0.11
P04214 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.71■□□□□ 0.11
P04214 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04214 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
P04214 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.71■□□□□ 0.11
P04214 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
P04214 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.71■□□□□ 0.11
P04214 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
P04214 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
P04214 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.7■□□□□ 0.1
P04214 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
P04214 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
P04214 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.7■□□□□ 0.1
P04214 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.7■□□□□ 0.1
P04214 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Gm45098-201ENSMUST00000207179 657 ntBASIC15.7■□□□□ 0.1
P04214 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
P04214 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.69■□□□□ 0.1
P04214 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
P04214 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.69■□□□□ 0.1
P04214 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04214 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
P04214 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
P04214 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
P04214 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.68■□□□□ 0.1
P04214 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
P04214 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
P04214 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.68■□□□□ 0.1
P04214 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.68■□□□□ 0.1
P04214 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04214 Gm8602-201ENSMUST00000184045 607 ntBASIC15.68■□□□□ 0.1
P04214 Mir7085-201ENSMUST00000184353 66 ntBASIC15.68■□□□□ 0.1
P04214 Gm37917-201ENSMUST00000194711 392 ntBASIC15.68■□□□□ 0.1
P04214 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms