Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Hoxa3P02831 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa3P02831 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hoxa3P02831 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.7□□□□□ -0.38
Hoxa3P02831 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hoxa3P02831 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Hoxa3P02831 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.69□□□□□ -0.38
Hoxa3P02831 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Gm6736-201ENSMUST00000166583 948 ntBASIC12.69□□□□□ -0.38
Hoxa3P02831 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.69□□□□□ -0.38
Hoxa3P02831 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.69□□□□□ -0.38
Hoxa3P02831 Gm27397-201ENSMUST00000184997 107 ntBASIC12.69□□□□□ -0.38
Hoxa3P02831 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.69□□□□□ -0.38
Hoxa3P02831 Gm7787-201ENSMUST00000216858 688 ntBASIC12.69□□□□□ -0.38
Hoxa3P02831 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Hoxa3P02831 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hoxa3P02831 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.69□□□□□ -0.38
Hoxa3P02831 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.69□□□□□ -0.38
Hoxa3P02831 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hoxa3P02831 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hoxa3P02831 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa3P02831 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa3P02831 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa3P02831 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa3P02831 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa3P02831 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa3P02831 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.68□□□□□ -0.38
Hoxa3P02831 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.68□□□□□ -0.38
Hoxa3P02831 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa3P02831 Gm2756-201ENSMUST00000195851 400 ntBASIC12.68□□□□□ -0.38
Hoxa3P02831 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa3P02831 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Hoxa3P02831 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa3P02831 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa3P02831 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa3P02831 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa3P02831 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Hoxa3P02831 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa3P02831 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa3P02831 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hoxa3P02831 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.67□□□□□ -0.38
Hoxa3P02831 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Hoxa3P02831 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Hoxa3P02831 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.67□□□□□ -0.38
Hoxa3P02831 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Hoxa3P02831 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.67□□□□□ -0.38
Hoxa3P02831 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.67□□□□□ -0.38
Hoxa3P02831 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.67□□□□□ -0.38
Hoxa3P02831 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.67□□□□□ -0.38
Hoxa3P02831 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Hoxa3P02831 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hoxa3P02831 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hoxa3P02831 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms