Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.29■□□□□ 0.2
Vti1aO89116 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Vti1aO89116 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.28■□□□□ 0.2
Vti1aO89116 Gm5177-201ENSMUST00000183092 997 ntBASIC16.28■□□□□ 0.2
Vti1aO89116 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Vti1aO89116 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Vti1aO89116 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vti1aO89116 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vti1aO89116 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vti1aO89116 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vti1aO89116 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.27■□□□□ 0.2
Vti1aO89116 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vti1aO89116 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vti1aO89116 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vti1aO89116 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vti1aO89116 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vti1aO89116 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vti1aO89116 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vti1aO89116 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vti1aO89116 Gm15427-201ENSMUST00000117288 531 ntBASIC16.27■□□□□ 0.2
Vti1aO89116 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.27■□□□□ 0.2
Vti1aO89116 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.27■□□□□ 0.2
Vti1aO89116 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.27■□□□□ 0.2
Vti1aO89116 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vti1aO89116 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.27■□□□□ 0.2
Vti1aO89116 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.27■□□□□ 0.2
Vti1aO89116 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.27■□□□□ 0.2
Vti1aO89116 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
Vti1aO89116 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.27■□□□□ 0.2
Vti1aO89116 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vti1aO89116 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.27■□□□□ 0.2
Vti1aO89116 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vti1aO89116 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.27■□□□□ 0.2
Vti1aO89116 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.27■□□□□ 0.2
Vti1aO89116 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vti1aO89116 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.27■□□□□ 0.19
Vti1aO89116 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vti1aO89116 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Vti1aO89116 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vti1aO89116 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vti1aO89116 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vti1aO89116 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vti1aO89116 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.26■□□□□ 0.19
Vti1aO89116 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Vti1aO89116 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vti1aO89116 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vti1aO89116 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Vti1aO89116 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vti1aO89116 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.26■□□□□ 0.19
Vti1aO89116 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vti1aO89116 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.26■□□□□ 0.19
Vti1aO89116 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.26■□□□□ 0.19
Vti1aO89116 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Vti1aO89116 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vti1aO89116 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.26■□□□□ 0.19
Vti1aO89116 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vti1aO89116 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.26■□□□□ 0.19
Vti1aO89116 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vti1aO89116 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Vti1aO89116 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vti1aO89116 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Vti1aO89116 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vti1aO89116 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.26■□□□□ 0.19
Vti1aO89116 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.26■□□□□ 0.19
Vti1aO89116 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vti1aO89116 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vti1aO89116 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vti1aO89116 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vti1aO89116 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vti1aO89116 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vti1aO89116 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vti1aO89116 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vti1aO89116 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vti1aO89116 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vti1aO89116 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vti1aO89116 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vti1aO89116 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms