Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rdh5O55240 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rdh5O55240 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh5O55240 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh5O55240 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh5O55240 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rdh5O55240 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh5O55240 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh5O55240 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh5O55240 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh5O55240 Gm11764-201ENSMUST00000120221 623 ntBASIC14.31□□□□□ -0.12
Rdh5O55240 Gm12350-201ENSMUST00000121208 462 ntBASIC14.31□□□□□ -0.12
Rdh5O55240 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.31□□□□□ -0.12
Rdh5O55240 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.31□□□□□ -0.12
Rdh5O55240 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh5O55240 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
Rdh5O55240 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.31□□□□□ -0.12
Rdh5O55240 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.31□□□□□ -0.12
Rdh5O55240 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.31□□□□□ -0.12
Rdh5O55240 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Rdh5O55240 Gm7787-201ENSMUST00000216858 688 ntBASIC14.31□□□□□ -0.12
Rdh5O55240 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh5O55240 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rdh5O55240 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh5O55240 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh5O55240 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh5O55240 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rdh5O55240 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh5O55240 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh5O55240 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rdh5O55240 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
Rdh5O55240 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Rdh5O55240 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rdh5O55240 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.3□□□□□ -0.12
Rdh5O55240 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.3□□□□□ -0.12
Rdh5O55240 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.3□□□□□ -0.12
Rdh5O55240 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.3□□□□□ -0.12
Rdh5O55240 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.3□□□□□ -0.12
Rdh5O55240 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.3□□□□□ -0.12
Rdh5O55240 AV026068-213ENSMUST00000223675 1171 ntBASIC14.3□□□□□ -0.12
Rdh5O55240 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rdh5O55240 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.3□□□□□ -0.12
Rdh5O55240 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rdh5O55240 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rdh5O55240 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rdh5O55240 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.29□□□□□ -0.12
Rdh5O55240 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rdh5O55240 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rdh5O55240 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rdh5O55240 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.29□□□□□ -0.12
Rdh5O55240 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Rdh5O55240 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.29□□□□□ -0.12
Rdh5O55240 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.29□□□□□ -0.12
Rdh5O55240 Mir5126-201ENSMUST00000175513 77 ntBASIC14.29□□□□□ -0.12
Rdh5O55240 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Rdh5O55240 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.29□□□□□ -0.12
Rdh5O55240 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rdh5O55240 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rdh5O55240 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms