Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.54□□□□□ -0.4
SncaO55042 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SncaO55042 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
SncaO55042 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SncaO55042 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SncaO55042 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.53□□□□□ -0.4
SncaO55042 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SncaO55042 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SncaO55042 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.53□□□□□ -0.4
SncaO55042 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.53□□□□□ -0.4
SncaO55042 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Gm6659-201ENSMUST00000174752 547 ntBASIC12.53□□□□□ -0.4
SncaO55042 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.53□□□□□ -0.4
SncaO55042 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
SncaO55042 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SncaO55042 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.53□□□□□ -0.4
SncaO55042 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.53□□□□□ -0.4
SncaO55042 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SncaO55042 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SncaO55042 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.52□□□□□ -0.4
SncaO55042 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SncaO55042 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SncaO55042 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SncaO55042 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SncaO55042 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SncaO55042 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SncaO55042 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SncaO55042 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SncaO55042 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.52□□□□□ -0.41
SncaO55042 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.52□□□□□ -0.41
SncaO55042 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SncaO55042 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SncaO55042 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.52□□□□□ -0.41
SncaO55042 Gm27742-201ENSMUST00000184667 60 ntBASIC12.52□□□□□ -0.41
SncaO55042 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.52□□□□□ -0.41
SncaO55042 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.52□□□□□ -0.41
SncaO55042 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.52□□□□□ -0.41
SncaO55042 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.52□□□□□ -0.41
SncaO55042 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SncaO55042 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SncaO55042 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SncaO55042 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SncaO55042 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SncaO55042 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SncaO55042 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SncaO55042 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SncaO55042 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SncaO55042 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SncaO55042 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SncaO55042 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.51□□□□□ -0.41
SncaO55042 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SncaO55042 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.51□□□□□ -0.41
SncaO55042 Gm15165-201ENSMUST00000118140 502 ntBASIC12.51□□□□□ -0.41
SncaO55042 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Gm25745-201ENSMUST00000174945 133 ntBASIC12.51□□□□□ -0.41
SncaO55042 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.51□□□□□ -0.41
SncaO55042 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
SncaO55042 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SncaO55042 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SncaO55042 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms