Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC19.19■□□□□ 0.66
Cntnap1O54991 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC19.19■□□□□ 0.66
Cntnap1O54991 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap1O54991 Gm4691-201ENSMUST00000182339 1000 ntBASIC19.19■□□□□ 0.66
Cntnap1O54991 Gm27501-201ENSMUST00000183599 107 ntBASIC19.19■□□□□ 0.66
Cntnap1O54991 Gm2451-201ENSMUST00000199447 999 ntBASIC19.19■□□□□ 0.66
Cntnap1O54991 Gm10290-201ENSMUST00000200451 999 ntBASIC19.19■□□□□ 0.66
Cntnap1O54991 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cntnap1O54991 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap1O54991 Gm45667-201ENSMUST00000210380 1316 ntBASIC19.18■□□□□ 0.66
Cntnap1O54991 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap1O54991 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap1O54991 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap1O54991 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap1O54991 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap1O54991 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap1O54991 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap1O54991 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap1O54991 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap1O54991 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap1O54991 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap1O54991 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cntnap1O54991 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap1O54991 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC19.18■□□□□ 0.66
Cntnap1O54991 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC19.18■□□□□ 0.66
Cntnap1O54991 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC19.18■□□□□ 0.66
Cntnap1O54991 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC19.18■□□□□ 0.66
Cntnap1O54991 Gm43118-201ENSMUST00000199149 775 ntBASIC19.18■□□□□ 0.66
Cntnap1O54991 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC19.18■□□□□ 0.66
Cntnap1O54991 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC19.18■□□□□ 0.66
Cntnap1O54991 Gm17795-201ENSMUST00000214505 757 ntBASIC19.18■□□□□ 0.66
Cntnap1O54991 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap1O54991 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cntnap1O54991 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.17■□□□□ 0.66
Cntnap1O54991 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap1O54991 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap1O54991 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap1O54991 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap1O54991 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cntnap1O54991 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap1O54991 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap1O54991 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap1O54991 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap1O54991 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.17■□□□□ 0.66
Cntnap1O54991 Mir877-201ENSMUST00000104738 85 ntBASIC19.17■□□□□ 0.66
Cntnap1O54991 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap1O54991 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC19.17■□□□□ 0.66
Cntnap1O54991 Gm38002-201ENSMUST00000193255 180 ntBASIC19.17■□□□□ 0.66
Cntnap1O54991 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC19.17■□□□□ 0.66
Cntnap1O54991 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap1O54991 AC155637.1-201ENSMUST00000218560 636 ntBASIC19.17■□□□□ 0.66
Cntnap1O54991 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap1O54991 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cntnap1O54991 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cntnap1O54991 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cntnap1O54991 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap1O54991 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cntnap1O54991 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap1O54991 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19.16■□□□□ 0.66
Cntnap1O54991 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.16■□□□□ 0.66
Cntnap1O54991 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap1O54991 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap1O54991 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.16■□□□□ 0.66
Cntnap1O54991 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC19.16■□□□□ 0.66
Cntnap1O54991 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap1O54991 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap1O54991 Gm24644-201ENSMUST00000157114 139 ntBASIC19.16■□□□□ 0.66
Cntnap1O54991 Gm6944-201ENSMUST00000182449 1006 ntBASIC19.16■□□□□ 0.66
Cntnap1O54991 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC19.16■□□□□ 0.66
Cntnap1O54991 AC153872.1-201ENSMUST00000199539 128 ntBASIC19.16■□□□□ 0.66
Cntnap1O54991 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC19.16■□□□□ 0.66
Cntnap1O54991 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap1O54991 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap1O54991 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap1O54991 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap1O54991 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap1O54991 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap1O54991 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap1O54991 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC19.16■□□□□ 0.66
Cntnap1O54991 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap1O54991 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap1O54991 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap1O54991 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cntnap1O54991 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap1O54991 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap1O54991 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap1O54991 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap1O54991 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap1O54991 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap1O54991 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap1O54991 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap1O54991 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC19.15■□□□□ 0.66
Cntnap1O54991 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC19.15■□□□□ 0.66
Cntnap1O54991 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cntnap1O54991 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Cntnap1O54991 Gm13464-201ENSMUST00000119418 935 ntBASIC19.15■□□□□ 0.66
Cntnap1O54991 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC19.15■□□□□ 0.66
Cntnap1O54991 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC19.15■□□□□ 0.66
Cntnap1O54991 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
Cntnap1O54991 Gm9176-201ENSMUST00000219955 1120 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms