Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prom1O54990 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Prom1O54990 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prom1O54990 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prom1O54990 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prom1O54990 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prom1O54990 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prom1O54990 Prob1-201ENSMUST00000097619 3021 ntBASIC16.62■□□□□ 0.25
Prom1O54990 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Prom1O54990 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prom1O54990 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Prom1O54990 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prom1O54990 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prom1O54990 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prom1O54990 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.61■□□□□ 0.25
Prom1O54990 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prom1O54990 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Prom1O54990 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prom1O54990 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prom1O54990 Gm5745-201ENSMUST00000183748 313 ntBASIC16.61■□□□□ 0.25
Prom1O54990 Gm28630-201ENSMUST00000187806 498 ntBASIC16.61■□□□□ 0.25
Prom1O54990 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.61■□□□□ 0.25
Prom1O54990 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prom1O54990 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prom1O54990 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.61■□□□□ 0.25
Prom1O54990 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prom1O54990 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prom1O54990 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prom1O54990 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Prom1O54990 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Prom1O54990 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prom1O54990 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Prom1O54990 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prom1O54990 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prom1O54990 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.61■□□□□ 0.25
Prom1O54990 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prom1O54990 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Prom1O54990 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prom1O54990 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.6■□□□□ 0.25
Prom1O54990 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prom1O54990 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Prom1O54990 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.6■□□□□ 0.25
Prom1O54990 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prom1O54990 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prom1O54990 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.6■□□□□ 0.25
Prom1O54990 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.6■□□□□ 0.25
Prom1O54990 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.6■□□□□ 0.25
Prom1O54990 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prom1O54990 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prom1O54990 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prom1O54990 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prom1O54990 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.6■□□□□ 0.25
Prom1O54990 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prom1O54990 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prom1O54990 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prom1O54990 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Prom1O54990 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.6■□□□□ 0.25
Prom1O54990 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Prom1O54990 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prom1O54990 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prom1O54990 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prom1O54990 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prom1O54990 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prom1O54990 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prom1O54990 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prom1O54990 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prom1O54990 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prom1O54990 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Prom1O54990 Gm13453-201ENSMUST00000118708 357 ntBASIC16.59■□□□□ 0.25
Prom1O54990 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.59■□□□□ 0.25
Prom1O54990 Gm23547-201ENSMUST00000158210 271 ntBASIC16.59■□□□□ 0.25
Prom1O54990 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.59■□□□□ 0.25
Prom1O54990 Gm5866-201ENSMUST00000177881 973 ntBASIC16.59■□□□□ 0.25
Prom1O54990 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.59■□□□□ 0.25
Prom1O54990 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prom1O54990 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.59■□□□□ 0.25
Prom1O54990 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prom1O54990 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.59■□□□□ 0.25
Prom1O54990 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prom1O54990 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prom1O54990 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.59■□□□□ 0.25
Prom1O54990 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prom1O54990 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.59■□□□□ 0.25
Prom1O54990 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prom1O54990 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Prom1O54990 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prom1O54990 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prom1O54990 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.58■□□□□ 0.25
Prom1O54990 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prom1O54990 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.58■□□□□ 0.24
Prom1O54990 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prom1O54990 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prom1O54990 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Prom1O54990 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Prom1O54990 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prom1O54990 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.58■□□□□ 0.24
Prom1O54990 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prom1O54990 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Prom1O54990 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Prom1O54990 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms