Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Tnfsf12O54907 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.44□□□□□ -0.42
Tnfsf12O54907 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Tnfsf12O54907 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.43□□□□□ -0.42
Tnfsf12O54907 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Gm4535-201ENSMUST00000182274 558 ntBASIC12.43□□□□□ -0.42
Tnfsf12O54907 Gm27646-201ENSMUST00000183989 110 ntBASIC12.43□□□□□ -0.42
Tnfsf12O54907 Gm17971-201ENSMUST00000190239 806 ntBASIC12.43□□□□□ -0.42
Tnfsf12O54907 Gm6296-201ENSMUST00000222599 943 ntBASIC12.43□□□□□ -0.42
Tnfsf12O54907 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.43□□□□□ -0.42
Tnfsf12O54907 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Birc2-201ENSMUST00000054878 378 ntBASIC12.43□□□□□ -0.42
Tnfsf12O54907 Gm10355-201ENSMUST00000097146 517 ntBASIC12.43□□□□□ -0.42
Tnfsf12O54907 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tnfsf12O54907 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Tnfsf12O54907 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Gm11780-201ENSMUST00000136880 516 ntBASIC12.42□□□□□ -0.42
Tnfsf12O54907 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.42□□□□□ -0.42
Tnfsf12O54907 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Tnfsf12O54907 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf12O54907 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf12O54907 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Tnfsf12O54907 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf12O54907 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf12O54907 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf12O54907 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.41□□□□□ -0.42
Tnfsf12O54907 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.41□□□□□ -0.42
Tnfsf12O54907 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.41□□□□□ -0.42
Tnfsf12O54907 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf12O54907 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.41□□□□□ -0.42
Tnfsf12O54907 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf12O54907 Gm11452-201ENSMUST00000122376 690 ntBASIC12.41□□□□□ -0.42
Tnfsf12O54907 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.41□□□□□ -0.42
Tnfsf12O54907 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfsf12O54907 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.41□□□□□ -0.42
Tnfsf12O54907 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.41□□□□□ -0.42
Tnfsf12O54907 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tnfsf12O54907 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.41□□□□□ -0.42
Tnfsf12O54907 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms