Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Npc1O35604 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Npc1O35604 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Npc1O35604 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.76□□□□□ -0.05
Npc1O35604 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Npc1O35604 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Npc1O35604 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.76□□□□□ -0.05
Npc1O35604 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.76□□□□□ -0.05
Npc1O35604 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.76□□□□□ -0.05
Npc1O35604 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.76□□□□□ -0.05
Npc1O35604 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Npc1O35604 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Npc1O35604 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.75□□□□□ -0.05
Npc1O35604 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Gm14494-201ENSMUST00000118786 435 ntBASIC14.75□□□□□ -0.05
Npc1O35604 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.75□□□□□ -0.05
Npc1O35604 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.75□□□□□ -0.05
Npc1O35604 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.75□□□□□ -0.05
Npc1O35604 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.75□□□□□ -0.05
Npc1O35604 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.75□□□□□ -0.05
Npc1O35604 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.75□□□□□ -0.05
Npc1O35604 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Npc1O35604 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Npc1O35604 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Npc1O35604 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Npc1O35604 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Npc1O35604 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Npc1O35604 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.74□□□□□ -0.05
Npc1O35604 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Npc1O35604 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Npc1O35604 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.74□□□□□ -0.05
Npc1O35604 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Npc1O35604 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Npc1O35604 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Npc1O35604 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Npc1O35604 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Npc1O35604 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Npc1O35604 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Npc1O35604 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.74□□□□□ -0.05
Npc1O35604 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.74□□□□□ -0.05
Npc1O35604 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Npc1O35604 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.74□□□□□ -0.05
Npc1O35604 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.74□□□□□ -0.05
Npc1O35604 Mir3113-201ENSMUST00000175478 76 ntBASIC14.74□□□□□ -0.05
Npc1O35604 Gm2756-201ENSMUST00000195851 400 ntBASIC14.74□□□□□ -0.05
Npc1O35604 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Npc1O35604 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.74□□□□□ -0.05
Npc1O35604 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.74□□□□□ -0.05
Npc1O35604 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Npc1O35604 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Npc1O35604 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Npc1O35604 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.74□□□□□ -0.05
Npc1O35604 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Npc1O35604 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Npc1O35604 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms