Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.02■□□□□ 0.31
Stx1aO35526 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.02■□□□□ 0.31
Stx1aO35526 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Stx1aO35526 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Stx1aO35526 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stx1aO35526 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.01■□□□□ 0.31
Stx1aO35526 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stx1aO35526 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stx1aO35526 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stx1aO35526 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Stx1aO35526 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Stx1aO35526 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Stx1aO35526 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.01■□□□□ 0.31
Stx1aO35526 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stx1aO35526 Gm25745-201ENSMUST00000174945 133 ntBASIC17.01■□□□□ 0.31
Stx1aO35526 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.01■□□□□ 0.31
Stx1aO35526 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.01■□□□□ 0.31
Stx1aO35526 Gm10252-201ENSMUST00000209541 832 ntBASIC17.01■□□□□ 0.31
Stx1aO35526 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.01■□□□□ 0.31
Stx1aO35526 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stx1aO35526 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stx1aO35526 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stx1aO35526 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Stx1aO35526 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stx1aO35526 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stx1aO35526 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Stx1aO35526 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stx1aO35526 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stx1aO35526 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Stx1aO35526 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Stx1aO35526 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Stx1aO35526 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Stx1aO35526 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17■□□□□ 0.31
Stx1aO35526 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Stx1aO35526 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17■□□□□ 0.31
Stx1aO35526 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Stx1aO35526 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Stx1aO35526 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Stx1aO35526 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17■□□□□ 0.31
Stx1aO35526 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Stx1aO35526 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Stx1aO35526 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Stx1aO35526 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17■□□□□ 0.31
Stx1aO35526 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17■□□□□ 0.31
Stx1aO35526 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17■□□□□ 0.31
Stx1aO35526 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Stx1aO35526 Gm8318-201ENSMUST00000182954 872 ntBASIC17■□□□□ 0.31
Stx1aO35526 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Stx1aO35526 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Stx1aO35526 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Stx1aO35526 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17■□□□□ 0.31
Stx1aO35526 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Stx1aO35526 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Stx1aO35526 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Stx1aO35526 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Stx1aO35526 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Stx1aO35526 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stx1aO35526 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stx1aO35526 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stx1aO35526 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Stx1aO35526 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stx1aO35526 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Stx1aO35526 Gm15165-201ENSMUST00000118140 502 ntBASIC16.99■□□□□ 0.31
Stx1aO35526 Gm4459-201ENSMUST00000118750 468 ntBASIC16.99■□□□□ 0.31
Stx1aO35526 Olfr129-201ENSMUST00000122318 993 ntBASIC16.99■□□□□ 0.31
Stx1aO35526 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Stx1aO35526 Gm12497-201ENSMUST00000138778 237 ntBASIC16.99■□□□□ 0.31
Stx1aO35526 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stx1aO35526 Gm23547-201ENSMUST00000158210 271 ntBASIC16.99■□□□□ 0.31
Stx1aO35526 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stx1aO35526 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.99■□□□□ 0.31
Stx1aO35526 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.99■□□□□ 0.31
Stx1aO35526 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.99■□□□□ 0.31
Stx1aO35526 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stx1aO35526 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Stx1aO35526 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stx1aO35526 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stx1aO35526 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stx1aO35526 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stx1aO35526 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.99■□□□□ 0.31
Stx1aO35526 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Stx1aO35526 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Stx1aO35526 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Stx1aO35526 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Stx1aO35526 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.98■□□□□ 0.31
Stx1aO35526 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.98■□□□□ 0.31
Stx1aO35526 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.98■□□□□ 0.31
Stx1aO35526 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.98■□□□□ 0.31
Stx1aO35526 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Stx1aO35526 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms