Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.22□□□□□ -0.13
Cx3cl1O35188 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.22□□□□□ -0.13
Cx3cl1O35188 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.22□□□□□ -0.13
Cx3cl1O35188 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.22□□□□□ -0.13
Cx3cl1O35188 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cx3cl1O35188 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cx3cl1O35188 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.21□□□□□ -0.13
Cx3cl1O35188 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.21□□□□□ -0.13
Cx3cl1O35188 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cx3cl1O35188 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cx3cl1O35188 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cx3cl1O35188 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.21□□□□□ -0.14
Cx3cl1O35188 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cx3cl1O35188 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cx3cl1O35188 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cx3cl1O35188 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cx3cl1O35188 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cx3cl1O35188 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Gm27300-201ENSMUST00000184085 97 ntBASIC14.2□□□□□ -0.14
Cx3cl1O35188 Gm27335-201ENSMUST00000184758 97 ntBASIC14.2□□□□□ -0.14
Cx3cl1O35188 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.2□□□□□ -0.14
Cx3cl1O35188 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cx3cl1O35188 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cx3cl1O35188 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cl1O35188 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.19□□□□□ -0.14
Cx3cl1O35188 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cx3cl1O35188 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cl1O35188 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cl1O35188 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Cx3cl1O35188 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cx3cl1O35188 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cx3cl1O35188 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms