Protein–RNA interactions for Protein: O35114

Scarb2, Lysosome membrane protein 2, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2O35114 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scarb2O35114 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scarb2O35114 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Scarb2O35114 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scarb2O35114 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scarb2O35114 Gm13418-201ENSMUST00000119097 944 ntBASIC14.12□□□□□ -0.15
Scarb2O35114 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.12□□□□□ -0.15
Scarb2O35114 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scarb2O35114 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.12□□□□□ -0.15
Scarb2O35114 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Scarb2O35114 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.12□□□□□ -0.15
Scarb2O35114 Gm44357-201ENSMUST00000195897 142 ntBASIC14.12□□□□□ -0.15
Scarb2O35114 Gm19658-201ENSMUST00000196231 138 ntBASIC14.12□□□□□ -0.15
Scarb2O35114 Gm44367-201ENSMUST00000196836 138 ntBASIC14.12□□□□□ -0.15
Scarb2O35114 Gm44350-201ENSMUST00000197197 138 ntBASIC14.12□□□□□ -0.15
Scarb2O35114 Gm44390-201ENSMUST00000197533 144 ntBASIC14.12□□□□□ -0.15
Scarb2O35114 Gm44313-201ENSMUST00000198018 138 ntBASIC14.12□□□□□ -0.15
Scarb2O35114 Gm44486-201ENSMUST00000198508 138 ntBASIC14.12□□□□□ -0.15
Scarb2O35114 Gm44314-201ENSMUST00000199263 138 ntBASIC14.12□□□□□ -0.15
Scarb2O35114 Gm44394-201ENSMUST00000199558 138 ntBASIC14.12□□□□□ -0.15
Scarb2O35114 Gm44484-201ENSMUST00000199873 138 ntBASIC14.12□□□□□ -0.15
Scarb2O35114 Gm44466-201ENSMUST00000200264 138 ntBASIC14.12□□□□□ -0.15
Scarb2O35114 Gm44359-201ENSMUST00000200671 138 ntBASIC14.12□□□□□ -0.15
Scarb2O35114 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scarb2O35114 Birc2-201ENSMUST00000054878 378 ntBASIC14.12□□□□□ -0.15
Scarb2O35114 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scarb2O35114 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scarb2O35114 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scarb2O35114 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scarb2O35114 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scarb2O35114 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scarb2O35114 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scarb2O35114 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scarb2O35114 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scarb2O35114 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scarb2O35114 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scarb2O35114 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Scarb2O35114 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Scarb2O35114 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Scarb2O35114 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.11□□□□□ -0.15
Scarb2O35114 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.11□□□□□ -0.15
Scarb2O35114 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Gm34391-201ENSMUST00000203706 907 ntBASIC14.11□□□□□ -0.15
Scarb2O35114 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.11□□□□□ -0.15
Scarb2O35114 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.11□□□□□ -0.15
Scarb2O35114 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Scarb2O35114 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Scarb2O35114 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scarb2O35114 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb2O35114 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Scarb2O35114 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb2O35114 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb2O35114 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb2O35114 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.1□□□□□ -0.15
Scarb2O35114 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.1□□□□□ -0.15
Scarb2O35114 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.1□□□□□ -0.15
Scarb2O35114 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb2O35114 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.1□□□□□ -0.15
Scarb2O35114 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb2O35114 Gm27459-201ENSMUST00000184860 107 ntBASIC14.1□□□□□ -0.15
Scarb2O35114 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.1□□□□□ -0.15
Scarb2O35114 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.1□□□□□ -0.15
Scarb2O35114 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.1□□□□□ -0.15
Scarb2O35114 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb2O35114 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Scarb2O35114 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Scarb2O35114 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb2O35114 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.1□□□□□ -0.15
Scarb2O35114 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb2O35114 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Scarb2O35114 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb2O35114 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb2O35114 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb2O35114 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb2O35114 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.1□□□□□ -0.15
Scarb2O35114 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb2O35114 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scarb2O35114 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Scarb2O35114 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms