Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Ebf3O08791 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.69■□□□□ 0.1
Ebf3O08791 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Ebf3O08791 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.69■□□□□ 0.1
Ebf3O08791 Gm5312-201ENSMUST00000203728 547 ntBASIC15.69■□□□□ 0.1
Ebf3O08791 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 App-207ENSMUST00000227737 2827 ntBASIC15.69■□□□□ 0.1
Ebf3O08791 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ebf3O08791 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ebf3O08791 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.68■□□□□ 0.1
Ebf3O08791 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.68■□□□□ 0.1
Ebf3O08791 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ebf3O08791 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.68■□□□□ 0.1
Ebf3O08791 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.68■□□□□ 0.1
Ebf3O08791 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.68■□□□□ 0.1
Ebf3O08791 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.68■□□□□ 0.1
Ebf3O08791 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ebf3O08791 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.68■□□□□ 0.1
Ebf3O08791 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ebf3O08791 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ebf3O08791 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Ebf3O08791 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Ebf3O08791 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.67■□□□□ 0.1
Ebf3O08791 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.67■□□□□ 0.1
Ebf3O08791 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ebf3O08791 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ebf3O08791 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ebf3O08791 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf3O08791 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Ebf3O08791 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.66■□□□□ 0.1
Ebf3O08791 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf3O08791 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf3O08791 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf3O08791 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf3O08791 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.66■□□□□ 0.1
Ebf3O08791 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Ebf3O08791 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf3O08791 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf3O08791 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf3O08791 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf3O08791 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf3O08791 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ebf3O08791 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.66■□□□□ 0.1
Ebf3O08791 AA543401-201ENSMUST00000164248 1269 ntBASIC15.66■□□□□ 0.1
Ebf3O08791 Gm20553-201ENSMUST00000204205 844 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms