Protein–RNA interactions for Protein: L7N2C4

Gm4340, Predicted gene 4340, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4340L7N2C4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 AA543401-201ENSMUST00000164248 1269 ntBASIC17.99■□□□□ 0.47
Gm4340L7N2C4 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Gm4340L7N2C4 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Gm22175-201ENSMUST00000175007 78 ntBASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Gm5779-201ENSMUST00000218467 910 ntBASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm4340L7N2C4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm4340L7N2C4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm4340L7N2C4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm4340L7N2C4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
Gm4340L7N2C4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm4340L7N2C4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm4340L7N2C4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm4340L7N2C4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm4340L7N2C4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm4340L7N2C4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm4340L7N2C4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm4340L7N2C4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm4340L7N2C4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm4340L7N2C4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm4340L7N2C4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm4340L7N2C4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Gm4340L7N2C4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Gm4340L7N2C4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Gm15693-201ENSMUST00000120470 637 ntBASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4340L7N2C4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Gm4340L7N2C4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Gm4340L7N2C4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms