Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa8J3QNX5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa8J3QNX5 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.79□□□□□ -0.2
Shisa8J3QNX5 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.79□□□□□ -0.2
Shisa8J3QNX5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa8J3QNX5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms