Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ScaperF8VQ70 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ScaperF8VQ70 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ScaperF8VQ70 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ScaperF8VQ70 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ScaperF8VQ70 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Gtpbp10-211ENSMUST00000198799 648 ntBASIC19.15■□□□□ 0.66
ScaperF8VQ70 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.15■□□□□ 0.66
ScaperF8VQ70 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.15■□□□□ 0.66
ScaperF8VQ70 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Gm2423-201ENSMUST00000074863 733 ntBASIC19.15■□□□□ 0.66
ScaperF8VQ70 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ScaperF8VQ70 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ScaperF8VQ70 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ScaperF8VQ70 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ScaperF8VQ70 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
ScaperF8VQ70 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ScaperF8VQ70 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.14■□□□□ 0.66
ScaperF8VQ70 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ScaperF8VQ70 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ScaperF8VQ70 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ScaperF8VQ70 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ScaperF8VQ70 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
ScaperF8VQ70 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ScaperF8VQ70 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ScaperF8VQ70 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ScaperF8VQ70 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ScaperF8VQ70 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.14■□□□□ 0.65
ScaperF8VQ70 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ScaperF8VQ70 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.14■□□□□ 0.65
ScaperF8VQ70 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ScaperF8VQ70 Gm37277-201ENSMUST00000194052 1111 ntBASIC19.14■□□□□ 0.65
ScaperF8VQ70 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.14■□□□□ 0.65
ScaperF8VQ70 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ScaperF8VQ70 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
ScaperF8VQ70 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ScaperF8VQ70 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ScaperF8VQ70 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ScaperF8VQ70 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ScaperF8VQ70 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
ScaperF8VQ70 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ScaperF8VQ70 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ScaperF8VQ70 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.13■□□□□ 0.65
ScaperF8VQ70 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.13■□□□□ 0.65
ScaperF8VQ70 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC19.13■□□□□ 0.65
ScaperF8VQ70 Gm15693-201ENSMUST00000120470 637 ntBASIC19.13■□□□□ 0.65
ScaperF8VQ70 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.13■□□□□ 0.65
ScaperF8VQ70 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC19.13■□□□□ 0.65
ScaperF8VQ70 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ScaperF8VQ70 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ScaperF8VQ70 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ScaperF8VQ70 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ScaperF8VQ70 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ScaperF8VQ70 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ScaperF8VQ70 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ScaperF8VQ70 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ScaperF8VQ70 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ScaperF8VQ70 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.12■□□□□ 0.65
ScaperF8VQ70 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ScaperF8VQ70 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ScaperF8VQ70 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ScaperF8VQ70 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ScaperF8VQ70 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ScaperF8VQ70 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms