Protein–RNA interactions for Protein: E9Q9Y3

Ccdc7b, Coiled-coil domain-containing 7B, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7bE9Q9Y3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm4459-201ENSMUST00000118750 468 ntBASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm14722-201ENSMUST00000118943 689 ntBASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm8344-201ENSMUST00000119813 856 ntBASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ccdc7bE9Q9Y3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm28659-201ENSMUST00000188013 759 ntBASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm18622-201ENSMUST00000219361 595 ntBASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm8655-201ENSMUST00000221159 852 ntBASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ccdc7bE9Q9Y3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Gm27459-201ENSMUST00000184860 107 ntBASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc7bE9Q9Y3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7bE9Q9Y3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms