Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb9E9Q5G2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb9E9Q5G2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Gm13365-201ENSMUST00000121188 973 ntBASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb9E9Q5G2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcdhb9E9Q5G2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb9E9Q5G2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb9E9Q5G2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb9E9Q5G2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb9E9Q5G2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb9E9Q5G2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb9E9Q5G2 Mir1895-201ENSMUST00000122615 79 ntBASIC17.71■□□□□ 0.43
Pcdhb9E9Q5G2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb9E9Q5G2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb9E9Q5G2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhb9E9Q5G2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhb9E9Q5G2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhb9E9Q5G2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb9E9Q5G2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb9E9Q5G2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb9E9Q5G2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms