Protein–RNA interactions for Protein: E9Q368

Tarbp1, TAR RNA-binding protein 1, mousemouse

Predictions only

Length 1,579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tarbp1E9Q368 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Tarbp1E9Q368 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tarbp1E9Q368 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tarbp1E9Q368 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tarbp1E9Q368 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tarbp1E9Q368 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC20.98■□□□□ 0.95
Tarbp1E9Q368 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tarbp1E9Q368 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.98■□□□□ 0.95
Tarbp1E9Q368 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tarbp1E9Q368 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tarbp1E9Q368 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Gm46209-201ENSMUST00000217912 553 ntBASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tarbp1E9Q368 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Gm4204-201ENSMUST00000110798 1231 ntBASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Gm14042-201ENSMUST00000120139 833 ntBASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Mir1897-201ENSMUST00000122581 272 ntBASIC20.96■□□□□ 0.95
Tarbp1E9Q368 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Gm9794-201ENSMUST00000202370 423 ntBASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tarbp1E9Q368 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Gm12859-201ENSMUST00000117834 427 ntBASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tarbp1E9Q368 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tarbp1E9Q368 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tarbp1E9Q368 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tarbp1E9Q368 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Tarbp1E9Q368 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC20.94■□□□□ 0.94
Tarbp1E9Q368 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tarbp1E9Q368 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tarbp1E9Q368 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC20.94■□□□□ 0.94
Tarbp1E9Q368 BC037039-201ENSMUST00000192003 2205 ntBASIC20.94■□□□□ 0.94
Tarbp1E9Q368 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Tarbp1E9Q368 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tarbp1E9Q368 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tarbp1E9Q368 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tarbp1E9Q368 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tarbp1E9Q368 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tarbp1E9Q368 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tarbp1E9Q368 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tarbp1E9Q368 Trav13-3-201ENSMUST00000117226 336 ntBASIC20.93■□□□□ 0.94
Tarbp1E9Q368 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Tarbp1E9Q368 Gm6218-201ENSMUST00000219812 628 ntBASIC20.93■□□□□ 0.94
Tarbp1E9Q368 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Tarbp1E9Q368 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tarbp1E9Q368 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Tarbp1E9Q368 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tarbp1E9Q368 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tarbp1E9Q368 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms