Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scaf11E9PZM7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Scaf11E9PZM7 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC20.83■□□□□ 0.93
Scaf11E9PZM7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC20.83■□□□□ 0.93
Scaf11E9PZM7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Scaf11E9PZM7 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scaf11E9PZM7 Gm7556-201ENSMUST00000201178 1084 ntBASIC20.83■□□□□ 0.93
Scaf11E9PZM7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC20.83■□□□□ 0.93
Scaf11E9PZM7 Gm19220-201ENSMUST00000222682 803 ntBASIC20.83■□□□□ 0.93
Scaf11E9PZM7 AC149588.3-201ENSMUST00000227515 150 ntBASIC20.83■□□□□ 0.93
Scaf11E9PZM7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scaf11E9PZM7 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Scaf11E9PZM7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scaf11E9PZM7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scaf11E9PZM7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scaf11E9PZM7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scaf11E9PZM7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scaf11E9PZM7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scaf11E9PZM7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scaf11E9PZM7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf11E9PZM7 Gm12390-201ENSMUST00000117897 397 ntBASIC20.82■□□□□ 0.92
Scaf11E9PZM7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC20.82■□□□□ 0.92
Scaf11E9PZM7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC20.82■□□□□ 0.92
Scaf11E9PZM7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf11E9PZM7 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf11E9PZM7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf11E9PZM7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf11E9PZM7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf11E9PZM7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf11E9PZM7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf11E9PZM7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scaf11E9PZM7 Gm45841-201ENSMUST00000207700 164 ntBASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Gm8062-201ENSMUST00000139696 444 ntBASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 AC156016.3-201ENSMUST00000228623 344 ntBASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scaf11E9PZM7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC20.8■□□□□ 0.92
Scaf11E9PZM7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf11E9PZM7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf11E9PZM7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf11E9PZM7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Scaf11E9PZM7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf11E9PZM7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf11E9PZM7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf11E9PZM7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf11E9PZM7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.8■□□□□ 0.92
Scaf11E9PZM7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC20.8■□□□□ 0.92
Scaf11E9PZM7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC20.8■□□□□ 0.92
Scaf11E9PZM7 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC20.8■□□□□ 0.92
Scaf11E9PZM7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf11E9PZM7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf11E9PZM7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scaf11E9PZM7 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Gm28911-201ENSMUST00000188837 117 ntBASIC20.79■□□□□ 0.92
Scaf11E9PZM7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scaf11E9PZM7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf11E9PZM7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf11E9PZM7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf11E9PZM7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scaf11E9PZM7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Scaf11E9PZM7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms