Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm10313-201ENSMUST00000095320 1002 ntBASIC20.95■□□□□ 0.94
Hfm1D3Z4R1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hfm1D3Z4R1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hfm1D3Z4R1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Gm27701-201ENSMUST00000184498 110 ntBASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Hfm1D3Z4R1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Gm5763-201ENSMUST00000155951 1530 ntBASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hfm1D3Z4R1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Hfm1D3Z4R1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC20.92■□□□□ 0.94
Hfm1D3Z4R1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hfm1D3Z4R1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hfm1D3Z4R1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hfm1D3Z4R1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hfm1D3Z4R1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hfm1D3Z4R1 Gm8749-201ENSMUST00000117737 331 ntBASIC20.92■□□□□ 0.94
Hfm1D3Z4R1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC20.92■□□□□ 0.94
Hfm1D3Z4R1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC20.92■□□□□ 0.94
Hfm1D3Z4R1 Olfr286-202ENSMUST00000205305 969 ntBASIC20.92■□□□□ 0.94
Hfm1D3Z4R1 AC165157.4-201ENSMUST00000220587 139 ntBASIC20.92■□□□□ 0.94
Hfm1D3Z4R1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hfm1D3Z4R1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hfm1D3Z4R1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC20.92■□□□□ 0.94
Hfm1D3Z4R1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hfm1D3Z4R1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hfm1D3Z4R1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hfm1D3Z4R1 Gm45751-201ENSMUST00000210185 1573 ntBASIC20.91■□□□□ 0.94
Hfm1D3Z4R1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
Hfm1D3Z4R1 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC20.91■□□□□ 0.94
Hfm1D3Z4R1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC20.91■□□□□ 0.94
Hfm1D3Z4R1 Mir6420-201ENSMUST00000185032 102 ntBASIC20.91■□□□□ 0.94
Hfm1D3Z4R1 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC20.91■□□□□ 0.94
Hfm1D3Z4R1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC20.91■□□□□ 0.94
Hfm1D3Z4R1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hfm1D3Z4R1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hfm1D3Z4R1 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC20.91■□□□□ 0.94
Hfm1D3Z4R1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hfm1D3Z4R1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC20.9■□□□□ 0.94
Hfm1D3Z4R1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hfm1D3Z4R1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hfm1D3Z4R1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hfm1D3Z4R1 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Hfm1D3Z4R1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Hfm1D3Z4R1 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Hfm1D3Z4R1 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC20.9■□□□□ 0.94
Hfm1D3Z4R1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Hfm1D3Z4R1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hfm1D3Z4R1 BC001981-202ENSMUST00000191393 1545 ntBASIC20.9■□□□□ 0.94
Hfm1D3Z4R1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hfm1D3Z4R1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hfm1D3Z4R1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hfm1D3Z4R1 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hfm1D3Z4R1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hfm1D3Z4R1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hfm1D3Z4R1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Hfm1D3Z4R1 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Hfm1D3Z4R1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hfm1D3Z4R1 Gm38319-201ENSMUST00000194537 1266 ntBASIC20.89■□□□□ 0.94
Hfm1D3Z4R1 AA619741-201ENSMUST00000195095 646 ntBASIC20.89■□□□□ 0.94
Hfm1D3Z4R1 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hfm1D3Z4R1 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hfm1D3Z4R1 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Hfm1D3Z4R1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
Hfm1D3Z4R1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms