Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim30cD3YVI9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Gm11452-201ENSMUST00000122376 690 ntBASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim30cD3YVI9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Gm9172-201ENSMUST00000212092 954 ntBASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Rps4l-201ENSMUST00000071745 943 ntBASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim30cD3YVI9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim30cD3YVI9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim30cD3YVI9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim30cD3YVI9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim30cD3YVI9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim30cD3YVI9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim30cD3YVI9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim30cD3YVI9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim30cD3YVI9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.52■□□□□ 0.24
Trim30cD3YVI9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim30cD3YVI9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim30cD3YVI9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.52■□□□□ 0.23
Trim30cD3YVI9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim30cD3YVI9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Trim30cD3YVI9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.52■□□□□ 0.23
Trim30cD3YVI9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Trim30cD3YVI9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim30cD3YVI9 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.52■□□□□ 0.23
Trim30cD3YVI9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.52■□□□□ 0.23
Trim30cD3YVI9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim30cD3YVI9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.52■□□□□ 0.23
Trim30cD3YVI9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim30cD3YVI9 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30cD3YVI9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
Trim30cD3YVI9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Gm4459-201ENSMUST00000118750 468 ntBASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Gm12497-201ENSMUST00000138778 237 ntBASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Gm44357-201ENSMUST00000195897 142 ntBASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Gm19658-201ENSMUST00000196231 138 ntBASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Gm44367-201ENSMUST00000196836 138 ntBASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Gm44350-201ENSMUST00000197197 138 ntBASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Gm44390-201ENSMUST00000197533 144 ntBASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Gm44313-201ENSMUST00000198018 138 ntBASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Gm44486-201ENSMUST00000198508 138 ntBASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Gm44314-201ENSMUST00000199263 138 ntBASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Gm44394-201ENSMUST00000199558 138 ntBASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Gm44484-201ENSMUST00000199873 138 ntBASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Gm44466-201ENSMUST00000200264 138 ntBASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Gm44359-201ENSMUST00000200671 138 ntBASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim30cD3YVI9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms