Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usf3B2RUQ2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.62□□□□□ -0.39
Usf3B2RUQ2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Usf3B2RUQ2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.61□□□□□ -0.39
Usf3B2RUQ2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usf3B2RUQ2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf3B2RUQ2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf3B2RUQ2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.6□□□□□ -0.39
Usf3B2RUQ2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usf3B2RUQ2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf3B2RUQ2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf3B2RUQ2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Usf3B2RUQ2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usf3B2RUQ2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Usf3B2RUQ2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf3B2RUQ2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.6□□□□□ -0.39
Usf3B2RUQ2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.6□□□□□ -0.39
Usf3B2RUQ2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.6□□□□□ -0.39
Usf3B2RUQ2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf3B2RUQ2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usf3B2RUQ2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Usf3B2RUQ2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms